test_format_registry ================== Testing Format Identifier ================== swissprot/38 swissprot/38 swissprot/38 ncbi-blastp ==================== Testing Format Parser ==================== EDD_RAT Seq('ARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNYALSLMRSHNDEHSDVLPV ...', SingleLetterAlphabet()) BLASTP ======================= Testing FormatIO ======================= Bio.FormatIO.FormatIOIterator EDD_RAT Ubiquitin--protein ligase EDD (EC 6.3.2.-) (Hyperplastic discs protein homolog) (100 kDa protein) (Fragment). Seq('ARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNYALSLMRSHNDEHSDVLPV ...', SingleLetterAlphabet()) >EDD_RAT Ubiquitin--protein ligase EDD (EC 6.3.2.-) (Hyperplastic discs protein homolog) (100 kDa protein) (Fragment). ARRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYV FQALIYWIKAMNQQTTLDTPQLERKRTRELLELGIDNEDSEHENDDDTSQSATLNDKDDESLPAETGQNHPF FRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSAGSGKCLVEVTMDRNC LEVLPTKMSYAANLKNVMNMQNRQKKAGEDQSMLAEEADSSKPGPSAHDVAAQLKSSLLAEIGLTESEGPPL TSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNQQSR DLSLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVTFKDEPGEGSGVARSFYTAIAQAFLSNEKLP NLDCIQNANKGTHTSLMQRLRNRGERDREREREREMRRSSGLRAGSRRDRDRDFRRQLSIDTRPFRPASEGN PSDDPDPLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELIVAHGR ENGADSILDLGLLDSSEKVQENRKRHGSSRSVVDMDLDDTDDGDDNAPLFYQPGKRGFYTPRPGKNTEARLN CFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLILASQSSDADAVFSAMD LAFAVDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLT AEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVERMSMTERQDLVYFWTSSPSLPASE EGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV =============== Testing Reading Multiple Records =============== >1348916 gi|1348916|gb|G26684|G26684 human STS STS_D11570.gi|1375195|gb|G26945|G26945 human STS SHGC-32699. GATCCCTACCCTTNCCGTTGGTCTCTNTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAACACAGGC CAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTNACTNTTGAGCTTCTGTTCCTAGAGAATCCTAGAG GCTTGATTGGCCCAGGCTGCTGTNTGTNCTGGAGGCAAAGAATCCCTACCTCCTAGGGGTGAAAGGAAATNA AAATGGAAAGTTCTTGTAGCGCAAGGCCTGACATGGGTAGCTGCTCAATAAATGCTAGTNTGTTATTTC >129628 gi|129628|sp|P07175|PARA_AGRTU PARA PROTEIN MPVVVVASSKGGAGKSTTAVVLGTELAHKGVPVTMLDCDPNRSLTIWANAGEVPENITALSDVTESSIVKTI KQHDVDGAVVIVDLEGVASRMVSRAISQADLVLIPMRPKALDATIGAQSLQLIAEEEEAIDRKIAHAVVFTM VSPAIRSHEYTGIKASLIENGVEIIEPPLVERTAYSALFQFGGNLHSMKSKQGNMAAAIENAEAFAMAIFKK LTEALR