test_locuslink
Testing Bio.LocusLink on LL_block
record 0
ACCNUM:
ACCNUM:
AC010642|9929687|na|43581|41119
TYPE:
g
ACCNUM:
AA484435|2213248|na|na|na
TYPE:
m
ACCNUM:
AF414429|15778555|na|na|na
PROT:
AAL07469|15778556
TYPE:
m
ACCNUM:
AI022193|3239546|na|na|na
TYPE:
m
ACCNUM:
AK055885|16550723|na|na|na
TYPE:
m
ACCNUM:
AK056201|16551539|na|na|na
TYPE:
m
ACCNUM:
T80683|703568|na|na|na
TYPE:
m
ACCNUM:
W25099|1302954|na|na|na
TYPE:
m
ALIAS_SYMBOL:
A1B
ABG
GAB
ASSEMBLY:
AF414429,AK055885,AK056201
CDD:
Immunoglobulin C-2 Type|smart00408|104|na|4.466900e+01
Immunoglobulin C-2 Type|smart00408|104|6.130e-06|44.669
CHR:
19
COMP:
10090|A1bg|na|na|117586|19|A1BG|ncbi_mgd
10090|A1bg|7|7 cM|117586|19|A1BG|ncbi_mgd
CONTIG:
NT_011104.11|20544099|na|1555258|1566315|+|19
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?A1BG
EVID:
supported by alignment with mRNA
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=373554
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=1
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=1[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:119638
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_130786
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_130786
LOCUSID:
1
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
19q13.4|RefSeq|C|
MAPLINK:
default_human_gene|A1BG
NM:
NM_130786|21071029|na
NP:
NP_570602|21071030
OFFICIAL_GENE_NAME:
alpha-1-B glycoprotein
OFFICIAL_SYMBOL:
A1BG
OMIM:
138670
ORGANISM:
Homo sapiens
PMID:
8889549,3458201,2591067
PREFERRED_PRODUCT:
alpha 1B-glycoprotein
PRODUCT:
alpha 1B-glycoprotein
STATUS:
REVIEWED
STS:
RH65092|-|10673|na|na|epcr
WI-16009|-|52209|na|na|epcr
G59506|-|136670|na|na|epcr
SUMMARY:
Summary: The protein encoded by this gene is a plasma glycoprotein of unknown function. The protein shows sequence similarity to the variable regions of some immunoglobulin supergene family member proteins.
UNIGENE:
Hs.373554
XM:
XM_058938|20544041|na
XP:
XP_058938|17482319|na
record 1
ACCNUM:
ACCNUM:
X68728|450521|na|na|na
PROT:
CAA48670|825615
TYPE:
g
ACCNUM:
Z11711|24760|na|na|na
PROT:
CAA77774|24761
TYPE:
g
ACCNUM:
M11313|177869|na|na|na
PROT:
AAA51551|177870
TYPE:
m
ACCNUM:
M36501|177871|na|na|na
PROT:
AAA51552|177872
TYPE:
m
ASSEMBLY:
M11313
CDD:
Ependymins|EPEND|86|na|3.773540e+01
Alpha-2-macroglobulin family|pfam00207|2501|na|9.679920e+02
Alpha-2-macroglobulin family N-terminal region|pfam01835|1889|na|7.322500e+02
Alpha-2-macroglobulin family|pfam00207|2449|0.000e+00|947.962
Alpha-2-macroglobulin family N-terminal region|pfam01835|1931|0.000e+00|748.429
CHR:
12
COMP:
10090|A2m|6|6 62.00 cM|11287|12|A2M|ncbi_mgd
10090|A2m|6|6 62.00 cM|11287|12|A2M|ucsc_mgd
CONTIG:
NT_009702.9|20554950|na|365512|413776|+|12
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?A2M
EVID:
supported by alignment with mRNA
EXTANNOT:
organismal role|CNS-specific functions|NR|Proteome|1281457
biochemical function|Inhibitor or repressor|NR|Proteome|1281457
GO:
molecular function|protein carrier|NR|GO:0008320|Proteome|na
molecular function|proteinase inhibitor|NR|GO:0004866|Proteome|na
biological process|intracellular protein traffic|NR|GO:0006886|Proteome|na
GRIF:
11811950|Differential binding to ldl receptor related protein
11823454|distinct binding sites mediate interaction with beta-amyloid peptide and growth factors
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=74561
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=2
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=2[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:119639
http://www.uwcm.ac.uk/uwcm/mg/search/119639.html
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_000014
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_000014
LOCUSID:
2
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
12p13.3-p12.3|HUGO|C|
MAPLINK:
default_human_gene|A2M
NM:
NM_000014|6226959|na
NP:
NP_000005|4557225
OFFICIAL_GENE_NAME:
alpha-2-macroglobulin
OFFICIAL_SYMBOL:
A2M
OMIM:
103950
ORGANISM:
Homo sapiens
PHENOTYPE:
PHENOTYPE:
Alzheimer disease, susceptibility to
PHENOTYPE_ID:
103950
PHENOTYPE:
Emphysema due to alpha-2-macroglobulin deficiency
PHENOTYPE_ID:
103950
PMID:
11823454,11811950,2581245,2408344,1707161,1370808,1281457
PREFERRED_PRODUCT:
alpha 2 macroglobulin precursor
PRODUCT:
alpha 2 macroglobulin precursor
STATUS:
REVIEWED
STS:
SGC31674|12|40245|na|na|epcr
RH11157|12|46849|na|na|epcr
G44356|12|95143|na|seq_map|epcr
SUMFUNC:
Alpha-2-macroglobulin; protease inhibitor, binds/aids in cellular internalization of proteins|Proteome
SUMMARY:
Summary: Alpha-2-macroglobulin is a protease inhibitor and cytokine transporter. It inhibits many proteases, including trypsin, thrombin and collagenase. A2M is implicated in Alzheimer disease (AD) due to its ability to mediate the clearance and degradation of A-beta, the major component of beta-amyloid deposits.
UNIGENE:
Hs.74561
XM:
XM_006925|18580498|na
XP:
XP_006925|17455493|na
record 2
ACCNUM:
ACCNUM:
M24415|187575|na|177|2881
TYPE:
g
CHR:
12
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?A2MP
LINK:
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:128103
LOCUSID:
3
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
pseudogene
MAP:
12p13.3-p12.3|HUGO|C|
MAPLINK:
default_human_cyto|A2MP
OFFICIAL_GENE_NAME:
alpha-2-macroglobulin pseudogene
OFFICIAL_SYMBOL:
A2MP
ORGANISM:
Homo sapiens
PMID:
2478422
STATUS:
REVIEWED
record 3
CHR:
11
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?AA
LINK:
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:568984
LOCUSID:
8
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
11p15|HUGO|C|
MAPLINK:
default_human_cyto|AA
OFFICIAL_GENE_NAME:
atrophia areata, peripapillary chorioretinal degeneration
OFFICIAL_SYMBOL:
AA
OMIM:
108985
ORGANISM:
Homo sapiens
PHENOTYPE:
PHENOTYPE:
Atrophia areata
PHENOTYPE_ID:
108985
PMID:
7795606
record 4
ACCNUM:
ACCNUM:
AF008204|2618821|na|na|na
PROT:
AAB84384|2258431
TYPE:
g
ACCNUM:
AF032677|2641552|na|na|na
PROT:
AAB86878|2641553
TYPE:
g
ACCNUM:
AF032678|2641554|na|na|na
PROT:
AAB86879|2641555
TYPE:
g
ACCNUM:
AF067408|3265061|na|na|na
PROT:
AAC24707|3265062
TYPE:
g
ACCNUM:
AF071552|3265151|na|na|na
PROT:
AAC24712|3265152
TYPE:
g
ACCNUM:
AF082903|3435297|na|na|na
PROT:
AAD13343|3435298
TYPE:
g
ACCNUM:
AF082904|3435299|na|na|na
PROT:
AAC32388|3435300
TYPE:
g
ACCNUM:
U80835|2245375|na|na|na
PROT:
AAB62398|2245376
TYPE:
g
ACCNUM:
X17059|34993|na|na|na
PROT:
CAA34905|34994
TYPE:
g
ACCNUM:
BC013732|16975545|na|na|na
PROT:
AAH13732|16975546
TYPE:
m
ACCNUM:
D90041|219413|na|na|na
PROT:
BAA14095|219414
TYPE:
m
ALIAS_PROT:
arylamine N-acetyltransferase-1
arylamide acetylase 1 (N-acetyltransferase 1)
ALIAS_SYMBOL:
AAC1
ASSEMBLY:
BC013732
CDD:
N-acetyltransferase|pfam00797|1030|na|4.056250e+02
CHR:
8
COMP:
10090|Nat1|8|8 31.00 cM|17960|8|NAT1|ncbi_mgd
10090|Nat1|8|8 31.00 cM|17960|8|NAT1|ucsc_mgd
10090|U35886|8|8 14135.38 cR|17961|8|AW390667|natgen_paper
CONTIG:
NT_030737.3|20541522|na|1907807|1921012|+|8
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?NAT1
DB_DESCR:
Arylamine N-Acetyltransferase Nomenclature
DB_LINK:
http://www.louisville.edu/medschool/pharmacology/NAT.html
ECNUM:
2.3.1.5
EVID:
supported by alignment with mRNA
EXTANNOT:
cellular role|Other metabolism|E|Proteome|10908296
biochemical function|Transferase|E|Proteome|10908296
GO:
molecular function|arylamine N-acetyltransferase|E|GO:0004060|Proteome|10908296
GRIF:
11955676|paclitaxel is an uncompetitive inhibitor to arylamine N-acetyltransferase (NAT) enzyme
11955677|paclitaxel affected human leukemia HL-60 cells arylamine N-acetyltransferase (NAT) activity and DNA-2-aminofluorene adduct formation.
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=155956
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=9
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=9[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:125364
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_000662
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_000662
LOCUSID:
9
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
8p23.1-p21.3|HUGO|C|
MAPLINK:
default_human_gene|NAT1
NM:
NM_000662|21361196|na
NP:
NP_000653|4505335
OFFICIAL_GENE_NAME:
N-acetyltransferase 1 (arylamine N-acetyltransferase)
OFFICIAL_SYMBOL:
NAT1
OMIM:
108345
ORGANISM:
Homo sapiens
PMID:
11955677,11955676,10908296,10862520,9168895,7773298,2340091
PREFERRED_PRODUCT:
N-acetyltransferase 1
PRODUCT:
N-acetyltransferase 1
STATUS:
PROVISIONAL
STS:
STS-D90041|8|57372|na|seq_map|epcr
RH70671|8|63787|na|seq_map|epcr
SUMFUNC:
Arylamine N-acetyltransferase 1; N- or O-acetylates arylamines and heterocyclic amines, detoxifies carcinogens and xenobiotics|Proteome
UNIGENE:
Hs.155956
XM:
NM_000662|21361196|na
XP:
NP_000653|4505335|na
record 5
ACCNUM:
ACCNUM:
AF042740|2801806|na|na|na
PROT:
AAC03773|2801807
TYPE:
g
ACCNUM:
AF055874|3063613|na|na|na
PROT:
AAC14117|3063614
TYPE:
g
ACCNUM:
AF055875|3063615|na|na|na
PROT:
AAC14118|3063616
TYPE:
g
ACCNUM:
D10870|219871|na|na|na
PROT:
BAA01640|219872
TYPE:
g
ACCNUM:
D10871|219874|na|na|na
PROT:
BAA01641|219875
TYPE:
g
ACCNUM:
D10872|219877|na|na|na
PROT:
BAA01642|219878
TYPE:
g
ACCNUM:
M75163|189075|na|na|na
PROT:
AAA59906|553602
TYPE:
g
ACCNUM:
M75164|189072|na|na|na
PROT:
AAA59905|553601
TYPE:
g
ACCNUM:
U23052|747646|na|na|na
PROT:
AAA64584|727413
TYPE:
g
ACCNUM:
U23434|727456|na|na|na
PROT:
AAA64585|727457
TYPE:
g
ACCNUM:
U53473|1297331|na|na|na
PROT:
AAA98976|1297332
TYPE:
g
ACCNUM:
X14672|28227|na|na|na
PROT:
CAA32802|28228
TYPE:
g
ACCNUM:
BC015878|16198419|na|na|na
PROT:
AAH15878|16198420
TYPE:
m
ACCNUM:
D90040|219411|na|na|na
PROT:
BAA14094|219412
TYPE:
m
ACCNUM:
D90042|219415|na|na|na
PROT:
BAA14096|219416
TYPE:
m
ALIAS_PROT:
Arylamine N-acetyltransferase-2
arylamide acetylase 2 (N-acetyltransferase 2, isoniazid inactivation)
ALIAS_SYMBOL:
AAC2
ASSEMBLY:
D90042
CDD:
N-acetyltransferase|pfam00797|838|na|3.274050e+02
CHR:
8
COMP:
10090|Nat2|8|8 31.00 cM|17961|8|NAT2|ncbi_mgd
10090|Nat2|8|8 31.00 cM|17961|8|NAT2|ucsc_mgd
CONTIG:
NT_030737.3|20541522|na|2088970|2098897|+|8
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?NAT2
DB_DESCR:
Arylamine N-Acetyltransferase Nomenclature
DB_LINK:
http://www.louisville.edu/medschool/pharmacology/NAT.html
ECNUM:
2.3.1.5
EVID:
supported by alignment with mRNA
EXTANNOT:
cellular role|Other metabolism|E|Proteome|2340091
biochemical function|Transferase|E|Proteome|2340091
GO:
molecular function|arylamine N-acetyltransferase|E|GO:0004060|Proteome|2340091
GRIF:
11846845|Association between bone loss in periodontal disease and polymorphism of N-acetyltransferase (NAT2)
11915035|Polymorphism of the N-acetyltransferase 2 gene as a susceptibility risk factor for antituberculosis drug-induced hepatitis.
12016157|urinary excretion of N(2)-(beta-1-glucos-iduronyl)-2-hydroxyamino-1-methyl-6-phenylimidazo[4,5-b]pyridine relationship to activity levels of NAT2
11872636|we investigated the relationship between the levels of aromatic DNA adducts in breast tissues and polymorphisms of the drug-metabolizing genes CYP1A1, NAT2, and GSTM1 in 166 women having breast cancer
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=2
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=10
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=10[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:125365
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_000015
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_000015
http://mgc.nci.nih.gov/Genes/GeneInfo?ORG=Hs&CID=2
LOCUSID:
10
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
8p22|HUGO|C|
MAPLINK:
default_human_gene|NAT2
NM:
NM_000015|4557782|na
NP:
NP_000006|4557783
OFFICIAL_GENE_NAME:
N-acetyltransferase 2 (arylamine N-acetyltransferase)
OFFICIAL_SYMBOL:
NAT2
OMIM:
243400
ORGANISM:
Homo sapiens
PMID:
12016157,11915035,11872636,11846845,8460648,8102597,7915226,7773298,2734109,2340091,1968463,1676262,1381364,1306121
PREFERRED_PRODUCT:
arylamide acetylase 2
PRODUCT:
arylamide acetylase 2
STATUS:
REVIEWED
STS:
G06461|8|17088|na|seq_map|epcr
WIAF-2120|8|44576|na|seq_map|epcr
G59899|8|137181|na|seq_map|epcr
GDB:187676|8|155563|na|seq_map|epcr
GDB:310612|8|156422|na|seq_map|epcr
GDB:310613|8|156423|na|seq_map|epcr
GDB:386004|8|157141|na|seq_map|epcr
SUMFUNC:
Arylamine N-acetyltransferase 2; N- or O-acetylates arylamines and heterocyclic amines|Proteome
SUMMARY:
Summary: The intronless NAT2 gene encodes N-acetyltransferase 2 (arylamine N-acetyltransferase 2). This enzyme functions to both activate and deactivate arylamine and hydrazine drugs and carcinogens. Polymorphisms in this gene are reponsible for the N-acetylation polymorphism in which human populations segregate into rapid,intermediate, and slow acetylator phenotypes. Polymorphisms in NAT2 are also associated with higher incidences of cancer and drug toxicity.A second arylamine N-acetyltransferase gene (NAT1) is located near NAT2.
UNIGENE:
Hs.2
XM:
NM_000015|4557782|na
XP:
NP_000006|4557783|na
record 6
ALIAS_SYMBOL:
NATP
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?AACP
LINK:
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:132838
LOCUSID:
11
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
pseudogene
OFFICIAL_GENE_NAME:
arylamide acetylase pseudogene
OFFICIAL_SYMBOL:
AACP
ORGANISM:
Homo sapiens
PMID:
2340091
record 7
ACCNUM:
ACCNUM:
X00947|28331|na|na|na
PROT:
CAA25459|28332
TYPE:
g
ACCNUM:
X68733|439137|na|na|na
PROT:
CAA48671|1340142
TYPE:
g
ACCNUM:
AF089747|4165889|na|na|na
PROT:
AAD08810|4165890
TYPE:
m
ACCNUM:
BC003559|13097704|na|na|na
PROT:
AAH03559|13097705
TYPE:
m
ACCNUM:
J05176|177932|na|na|na
PROT:
AAA51560|177933
TYPE:
m
ACCNUM:
K01500|177808|na|na|na
PROT:
AAA51543|177809
TYPE:
m
ACCNUM:
M18906|177928|na|na|na
PROT:
AAA51559|177931
TYPE:
m
ALIAS_PROT:
actichymotrypsin
alpha-1-antichymotrypsin
ALIAS_SYMBOL:
ACT
AACT
ASSEMBLY:
AH002551,K01500
CDD:
SERine Proteinase INhibitors|SERPIN|950|na|3.744620e+02
Serpins (serine protease inhibitors)|pfam00079|932|na|3.674510e+02
Serpin (S protease inhibitor)|pfam00079|1225|5.273e-136|476.478
SERine Proteinase INhibitors|smart00093|1168|2.146e-129|454.521
CHR:
14
COMP:
10090|Pre2|12|12 52.00 cM|109636|14|SERPINA3|ucsc_mgd
10090|X69832|12|12 957.87 cR|20717|14|AV689358|ucsc_est
10090|AI194247|16|16 509.87 cR|16423|14|AW819120|ucsc_est
CONTIG:
NT_026437.7|20543860|na|28765484|28777145|+|14
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?SERPINA3
EVID:
supported by alignment with mRNA
EXTANNOT:
biochemical function|Inhibitor or repressor|NR|Proteome|2404007
GO:
molecular function|plasma protein|NR|GO:0005209|Proteome|na
biological process|acute-phase response|NR|GO:0006953|Proteome|na
molecular function|proteinase inhibitor|NR|GO:0004866|Proteome|na
molecular function|serine protease inhibitor|E|GO:0004867|Proteome|2404007
GRIF:
11959399|significantly higher in plasma of Alzheimer patients compared to controls
11798857|A25G and G39A substitutions in the AACT gene are probably one of the risk factors to Alzheimer's disease (AD) in Han Chinese.
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=234726
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=12
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=12[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:118955
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_001085
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_001085
http://mgc.nci.nih.gov/Genes/GeneInfo?ORG=Hs&CID=234726
LOCUSID:
12
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
14q32.1|HUGO|C|
MAPLINK:
default_human_gene|SERPINA3
NM:
NM_001085|9665246|na
NP:
NP_001076|4501843
OFFICIAL_GENE_NAME:
serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
OFFICIAL_SYMBOL:
SERPINA3
OMIM:
107280
ORGANISM:
Homo sapiens
PHENOTYPE:
PHENOTYPE:
Alpha-1-antichymotrypsin deficiency
PHENOTYPE_ID:
107280
PHENOTYPE:
Cerebrovascular disease, occlusive
PHENOTYPE_ID:
107280
PMID:
11959399,11798857,9880565,8244391,6687683,6606438,6556193,6547997,3492865,3485824,3260956,3257719,2404007,1351206
PREFERRED_PRODUCT:
alpha-1-antichymotrypsin, precursor
PRODUCT:
alpha-1-antichymotrypsin, precursor
STATUS:
REVIEWED
STS:
RH1625|14|32177|na|seq_map|epcr
SHGC-32982|14|37467|na|na|epcr
D14S845|14|64155|D14S845|seq_map|epcr
G31126|14|66238|na|seq_map|epcr
RH78280|14|74665|na|seq_map|epcr
RH91507|14|86678|na|seq_map|epcr
D14S1143|-|148321|D14S1143|na|epcr
SUMFUNC:
Alpha-1-antichymotrypsin; member of the serpin family of serine protease inhibitors|Proteome
SUMMARY:
Summary: The protein encoded by this gene is a plasma protease inhibitor and member of the serine protease inhibitor class. Polymorphisms in this protein appear to be tissue specific and influence protease targeting. Variation in this protein's sequence have been implicated in Alzheimer's disease, and deficiency of this protein has been associated with liver disease. Mutations have been identified in patients with Parkinson disease and chronic obstructive pulmonary disease.
UNIGENE:
Hs.234726
XM:
XM_028322|14748211|na
XP:
XP_028322|14748212|na
record 8
ACCNUM:
ACCNUM:
L32179|537513|na|na|na
PROT:
AAA35551|537514
TYPE:
m
ALIAS_SYMBOL:
DAC
ASSEMBLY:
L32179
CDD:
Carboxylesterases|pfam00135|154|na|6.439850e+01
Carboxylesterase|pfam00135|137|7.185e-10|57.381
CHR:
3
COMP:
10090|Aadac|3|3 cM|67758|3|AADAC|ncbi_mgd
10090|AI265437|3|3 5067.00 cR|67758|3|AA702448|natgen_paper
CONTIG:
NT_005849.11|20537660|na|726090|740503|+|3
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?AADAC
DB_DESCR:
KEGG pathway: Butanoate metabolism
DB_LINK:
http://www.genome.ad.jp/dbget-bin/get_pathway?org_name=hsa&mapno=00650
DB_DESCR:
KEGG pathway: 2,4-Dichlorobenzoate degradation
DB_LINK:
http://www.genome.ad.jp/dbget-bin/get_pathway?org_name=hsa&mapno=00623
DB_DESCR:
KEGG pathway: Pentose and glucuronate interconversions
DB_LINK:
http://www.genome.ad.jp/dbget-bin/get_pathway?org_name=hsa&mapno=00040
ECNUM:
3.1.1.-
EVID:
supported by alignment with mRNA
EXTANNOT:
cellular role|Other metabolism|P|Proteome|8063807
subcellular localization|Microsomal fraction|NR|Proteome|8063807
GO:
molecular function|enzyme|P|GO:0003824|Proteome|8063807
cellular component|microsome|E|GO:0005792|Proteome|8063807
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=587
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=13
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=13[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:392587
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_001086
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_001086
LOCUSID:
13
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
3q21.3-q25.2|RefSeq|C|
MAPLINK:
default_human_gene|AADAC
NM:
NM_001086|4557226|na
NP:
NP_001077|4557227
OFFICIAL_GENE_NAME:
arylacetamide deacetylase (esterase)
OFFICIAL_SYMBOL:
AADAC
OMIM:
600338
ORGANISM:
Homo sapiens
PMID:
9299245,8063807
PREFERRED_PRODUCT:
arylacetamide deacetylase
PRODUCT:
arylacetamide deacetylase
STATUS:
REVIEWED
STS:
STS-L32179|3|13170|na|seq_map|epcr
D3S4189|-|18863|D3S4189|na|epcr
RH36344|3|24707|na|seq_map|epcr
RH124029|-|136046|na|na|epcr
SUMFUNC:
Liver microsomal arylacetamide deacetylase; esterase involved in metabolically activating arylamine carcinogens|Proteome
SUMMARY:
Summary: Microsomal arylacetamide deacetylase competes against the activity of cytosolic arylamine N-acetyltransferase, which catalyzes one of the initial biotransformation pathways for arylamine and heterocyclic amine carcinogens
UNIGENE:
Hs.587
XM:
XM_003002|12729778|na
XP:
XP_003002|11433103|na
record 9
ACCNUM:
ACCNUM:
BC020244|18044383|na|na|na
PROT:
AAH20244|18044384
TYPE:
m
ACCNUM:
M95627|870802|na|na|na
PROT:
AAA68889|870803
TYPE:
m
ASSEMBLY:
M95627
CDD:
WD40 repeats|smart00320|97|na|4.197260e+01
WD domain, G-beta repeat|pfam00400|90|na|3.927620e+01
CHR:
2
CONTIG:
NT_005403.9|20537925|na|9668494|9674501|+|2
DB:
DB_DESCR:
GeneCards
DB_LINK:
http://bioinformatics.weizmann.ac.il/cards-bin/carddisp?AAMP
EVID:
supported by alignment with both mRNA and ESTs (3)
EXTANNOT:
organismal role|Cell migration/motility|P|Proteome|7743515
biochemical function|Adhesin/agglutinin|NR|Proteome|7743515
GO:
biological process|cell motility|NR|GO:0006928|Proteome|na
molecular function|heparin binding|P|GO:0008201|Proteome|7743515
LINK:
http://www.ncbi.nlm.nih.gov/UniGene/clust.cgi?ORG=Hs&CID=83347
http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?locusId=14
http://www.ncbi.nlm.nih.gov/HomoloGene/homolquery.cgi?TEXT=14[loc]
http://gdbwww.gdb.org/gdb-bin/genera/accno?GDB:4573993
http://www.ensembl.org/Homo_sapiens/contigview?geneid=NM_001087
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg12&position=NM_001087
LOCUSID:
14
LOCUS_CONFIRMED:
yes
LOCUS_TYPE:
gene with protein product, function known or inferred
MAP:
2q36.1|RefSeq|C|
MAPLINK:
default_human_gene|AAMP
NM:
NM_001087|4557228|na
NP:
NP_001078|4557229
OFFICIAL_GENE_NAME:
angio-associated, migratory cell protein
OFFICIAL_SYMBOL:
AAMP
OMIM:
603488
ORGANISM:
Homo sapiens
PMID:
7743515
PREFERRED_PRODUCT:
angio-associated, migratory cell protein
PRODUCT:
angio-associated, migratory cell protein
STATUS:
REVIEWED
STS:
SGC31591|2|52581|na|seq_map|epcr
SUMFUNC:
immunoglobulin-type protein; may mediate heparin-sensitive cell adhesion, may act in cell migration|Proteome
SUMMARY:
Summary: The gene product is an immunoglobulin-type protein. It is found to be expressed strongly in endothelial cells, cytotrophoblasts, and poorly differentiated colon adenocarcinoma cells found in lymphatics. The protein contains a heparin-binding domain and mediates heparin-sensitive cell adhesion.
UNIGENE:
Hs.83347
XM:
NM_001087|4557228|na
XP:
NP_001078|4557229|na