#ifdef _cplusplus extern "C" { #endif #include "gwquickdb.h" /* Function: init_GeneWiseQuickDB(gdb,return_status) * * Descrip: inits a genewisequick database. * * * Arg: gdb [UNKN ] Undocumented argument [GeneWiseQuickDB *] * Arg: return_status [UNKN ] Undocumented argument [int *] * * Return [UNKN ] Undocumented return value [GeneWiseScoreFlat *] * */ # line 37 "gwquickdb.dy" GeneWiseScoreFlat * init_GeneWiseQuickDB(GeneWiseQuickDB * gdb,int * return_status) { GeneWiseScore * gws; gws = init_GeneWiseDB(gdb->gwdb,return_status); if( gws != NULL ) { return GeneWiseScoreFlat_from_GeneWiseScore(gws); } } /* Function: reload_GeneWiseQuickDB(prev,gdb,return_status) * * Descrip: Reloads a genewisequick database * * * * Arg: prev [UNKN ] Undocumented argument [GeneWiseScoreFlat *] * Arg: gdb [UNKN ] Undocumented argument [GeneWiseQuickDB *] * Arg: return_status [UNKN ] Undocumented argument [int *] * * Return [UNKN ] Undocumented return value [GeneWiseScoreFlat *] * */ # line 53 "gwquickdb.dy" GeneWiseScoreFlat * reload_GeneWiseQuickDB(GeneWiseScoreFlat * prev,GeneWiseQuickDB * gdb,int * return_status) { GeneWiseScore * gws; if( prev != NULL ) free_GeneWiseScoreFlat(prev); gws = reload_GeneWiseDB(NULL,gdb->gwdb,return_status); if( gws != NULL ) { return GeneWiseScoreFlat_from_GeneWiseScore(gws); } } /* Function: close_GeneWiseQuickDB(gws,gdb) * * Descrip: closes a GeneWiseDB * * * Arg: gws [UNKN ] Undocumented argument [GeneWiseScoreFlat *] * Arg: gdb [UNKN ] Undocumented argument [GeneWiseQuickDB *] * * Return [UNKN ] Undocumented return value [boolean] * */ # line 71 "gwquickdb.dy" boolean close_GeneWiseQuickDB(GeneWiseScoreFlat * gws,GeneWiseQuickDB * gdb) { if( gws != NULL ) free_GeneWiseScoreFlat(gws); return close_GeneWiseDB(NULL,gdb->gwdb); } /* Function: dataentry_add_GeneWiseQuickDB(de,gws,gdb) * * Descrip: adds dataentry stuff to a query. * * * Arg: de [UNKN ] Undocumented argument [DataEntry *] * Arg: gws [UNKN ] Undocumented argument [GeneWiseScoreFlat *] * Arg: gdb [UNKN ] Undocumented argument [GeneWiseQuickDB *] * * Return [UNKN ] Undocumented return value [boolean] * */ # line 82 "gwquickdb.dy" boolean dataentry_add_GeneWiseQuickDB(DataEntry * de,GeneWiseScoreFlat * gws,GeneWiseQuickDB * gdb) { return dataentry_add_GeneWiseDB(de,NULL,gdb->gwdb); } /* Function: GeneWiseQuickDB_from_GeneWiseDB(gwdb) * * Descrip: Makes a new genewisequickdb from a genewisemodeldb * * * Arg: gwdb [READ ] genewisedb - hard links as it enters [GeneWiseDB *] * * Return [UNKN ] Undocumented return value [GeneWiseQuickDB *] * */ # line 92 "gwquickdb.dy" GeneWiseQuickDB * GeneWiseQuickDB_from_GeneWiseDB(GeneWiseDB * gwdb) { GeneWiseQuickDB * out; out = GeneWiseQuickDB_alloc(); out->gwdb = hard_link_GeneWiseDB(gwdb); return out; } # line 108 "gwquickdb.c" /* Function: hard_link_GeneWiseQuickDB(obj) * * Descrip: Bumps up the reference count of the object * Meaning that multiple pointers can 'own' it * * * Arg: obj [UNKN ] Object to be hard linked [GeneWiseQuickDB *] * * Return [UNKN ] Undocumented return value [GeneWiseQuickDB *] * */ GeneWiseQuickDB * hard_link_GeneWiseQuickDB(GeneWiseQuickDB * obj) { if( obj == NULL ) { warn("Trying to hard link to a GeneWiseQuickDB object: passed a NULL object"); return NULL; } obj->dynamite_hard_link++; return obj; } /* Function: GeneWiseQuickDB_alloc(void) * * Descrip: Allocates structure: assigns defaults if given * * * * Return [UNKN ] Undocumented return value [GeneWiseQuickDB *] * */ GeneWiseQuickDB * GeneWiseQuickDB_alloc(void) { GeneWiseQuickDB * out; /* out is exported at end of function */ /* call ckalloc and see if NULL */ if((out=(GeneWiseQuickDB *) ckalloc (sizeof(GeneWiseQuickDB))) == NULL) { warn("GeneWiseQuickDB_alloc failed "); return NULL; /* calling function should respond! */ } out->dynamite_hard_link = 1; out->gwdb = NULL; return out; } /* Function: free_GeneWiseQuickDB(obj) * * Descrip: Free Function: removes the memory held by obj * Will chain up to owned members and clear all lists * * * Arg: obj [UNKN ] Object that is free'd [GeneWiseQuickDB *] * * Return [UNKN ] Undocumented return value [GeneWiseQuickDB *] * */ GeneWiseQuickDB * free_GeneWiseQuickDB(GeneWiseQuickDB * obj) { if( obj == NULL) { warn("Attempting to free a NULL pointer to a GeneWiseQuickDB obj. Should be trappable"); return NULL; } if( obj->dynamite_hard_link > 1) { obj->dynamite_hard_link--; return NULL; } if( obj->gwdb != NULL) free_GeneWiseDB(obj->gwdb); ckfree(obj); return NULL; } #ifdef _cplusplus } #endif