/*-------------------------------------------------------------------- * $Id: pssegyz.c,v 1.3.4.1 2002/02/27 17:41:10 pwessel Exp $ * * Copyright (c) 1999-2001 by T. Henstock * See README file for copying and redistribution conditions. *--------------------------------------------------------------------*/ /* pssegyz program to plot segy files in 3d in postscript with variable trace spacing option * uses routines from the GMT pslib (the postscript imagemask for plotting a * 1-bit depth bitmap which will not obliterate stuff underneath! * * Author: Tim Henstock (Timothy.J.Henstock@soc.soton.ac.uk) * Date: 17-Nov-97 * Version: 1.0 * * heavily modified from pssegy version 1.2 * * Bug fixes: 1.1, 11-6-96 remove undesirable normalization introduced by -Z option. Add -U option for reduction. * * add option for colored bitmap (modified psimagemask as well..., old version will segfault probably) * * enhancements: 1.2 , 1/7/99 check number of samples trace by trace to cope with SEGY with variable trace length * NB that -T option from pssegy is _not_ transferred * * 2.0, 6/7/99 update for GMT v 3.3.1 * * 2.1 10/4/2001 fix unreduce bug, modify to byte-swap integers in the headers, make 64-bit safe * * This program is free software and may be copied, modified or redistributed * under the terms of the GNU public license, see http://www.gnu.org */ #include "gmt.h" #include "segy_io.h" /* internal function calls */ double rms( float *data, int nsamp); void wig_bmap(double x0, double y0, float data0, float data1, double z0, double z1, double dev_x, double dev_y); void shade_bmap( double x0, double y0, float data0, float data1, double z0, double z1, int negative, double dev_x, double dev_y); void plot_trace(float *data, double dz, double x0, double y0, int n_samp, int do_fill, int negative, int plot_wig, float toffset, double dev_x, double dev_y); void shade_tri (double apex_x, double apex_y, double edge_y, double slope, double slope0); void shade_quad (double x0, double y0, double x1, double y_edge, double slope1, double slope0); int paint(int ix, int iy); unsigned char bmask[8]={128, 64, 32, 16, 8, 4, 2, 1}; unsigned char *bitmap; int bm_nx, bm_ny; main (int argc, char **argv) { int error = FALSE; int xplot_cdp = FALSE, xplot_offset = FALSE, fix_x = FALSE, byte_x = 0; /* parameters for location plot */ int yplot_cdp = FALSE, yplot_offset = FALSE, fix_y = FALSE, byte_y = 0; int doclip = FALSE; int normalize = FALSE, do_fill = FALSE, negative = FALSE, plot_wig = FALSE; int no_zero = FALSE, polarity=1; int swap_bytes = !WORDS_BIGENDIAN; int i, nm; int ix, iz, n_traces=10000, n_samp=0, n_sampr=0, shade[3]={0,0,0}; int check; double w, e, s, n, dx = 1.0, dz = 0.0; /* dx, dz are trace and sample interval */ double xlen, ylen, xpix, ypix; double x0 = 0.0 , y0 = 0.0; float bias = 0.0, scale = 1.0, clip = 0.0, dev_x = 0.0, dev_y = 0.0; double redvel=0.0; float toffset=0.0; char input[512]; char *text; char *head; long *head2; char reelhead[3200]; float *data; SEGYHEAD *header; SEGYREEL binhead; FILE *fpi = NULL; input[0] = 0; w = e = s = n = 0.0; GMT_begin (argc, argv); for (i = 1; i < argc; i++) { if (argv[i][0] == '-') { switch (argv[i][1]) { /* Common parameters */ case 'V': case 'R': case 'J': case 'O': case 'K': case 'P': case '\0': error += GMT_get_common_args (argv[i], &w, &e, &s, &n); break; case 'E': sscanf (&argv[i][2], "%lf/%lf", &z_project.view_azimuth, &z_project.view_elevation); break; /* parameters for wiggle mode */ case 'F': do_fill = TRUE; if (GMT_getrgb (&argv[i][2], shade)) { ++error; GMT_rgb_syntax ('F'); } break; case 'I': negative = TRUE; break; case 'W': plot_wig = TRUE; break; /* trace norm., clip and bias */ case 'N': normalize = TRUE; break; case 'C': doclip = TRUE; clip = (float) atof (&argv[i][2]); break; case 'B': bias = (float) atof (&argv[i][2]); break; case 'Z': no_zero = TRUE; break; /* variable spacing */ case 'S': if ((text = strstr(&argv[i][2], "/")) != NULL) { text = strtok(&argv[i][2], "/"); if ((text[0] >='0' && text[0]<='9') || text[0] == '-'){ fix_x = TRUE; x0 = (double) atof(text); } else{ switch(text[0]){ case 'o': xplot_offset = TRUE; break; case 'c': xplot_cdp = TRUE; break; case 'b': byte_x = atoi(&text[1]); break; } } /* now parameters for y */ text = strtok(CNULL, "/"); if (text != NULL){ if ((text[0] >='0' && text[0]<='9') || text[0] == '-'){ fix_y = TRUE; y0 = (double) atof(text); } else{ switch(text[0]){ case 'o': yplot_offset = TRUE; break; case 'c': yplot_cdp = TRUE; break; case 'b': byte_y = atoi(&text[1]); break; } } } else{ fprintf(stderr,"%s: Must specify parameters for x and y \n", GMT_program); ++error; } } else{ fprintf(stderr,"%s: Must specify parameters for x and y \n", GMT_program); ++error; } /*error += (!xplot_cdp && !xplot_offset && !byte_x && !fix_x); error += (!yplot_cdp && !yplot_offset && !byte_x && !fix_y);*/ break; /* trace scaling */ case 'D': if ((text = strstr(&argv[i][2], "/")) != NULL) { text = strtok(&argv[i][2], "/"); dev_x = (float) atof (text); text = strtok(CNULL, "/"); dev_y = (float) atof (text); } else dev_x = (float) atof (&argv[i][2]); /*error += ((dev_x < 0.0) && (dev_y < 0.0));*/ error += (!dev_x && !dev_y); /*fprintf (stderr, "dev_x %f \t dev_y %f \n",dev_x, dev_y);*/ break; /* over-rides of header info */ case 'X': /* -X and -Y can be changed in gmt routines to lower case...*/ case 'x': dx = atof (&argv[i][2]); break; case 'Y': case 'y': dz = atof (&argv[i][2]); break; case 'L': n_sampr = atoi (&argv[i][2]); break; case 'M': n_traces = atoi (&argv[i][2]); break; /* reduction velocity application */ case 'U': redvel = atof (&argv[i][2]); break; case 'A': swap_bytes = !swap_bytes; break; default: error = TRUE; break; } } else if ((fpi = fopen (argv[i], "rb")) == NULL) { fprintf (stderr, "%s: Cannot find segy file %s\n", GMT_program, argv[i]); exit (EXIT_FAILURE); } } if (argc == 1 || GMT_quick) { fprintf (stderr, "pssegyz %s - Plot a segy file in PostScript\n\n", GMT_VERSION); fprintf (stderr, "usage: pssegyz [] -J -R -D \n"); fprintf (stderr, " [-E] [-C] [-B] [-N] [-Z]\n"); fprintf (stderr, " [-F|] [-I] [-W] [-S/]\n"); fprintf (stderr, " [-X] [-Y] [-L] [-M] \n"); fprintf (stderr, " [-U] [-A] [-O] [-K] [-P]\n"); if (GMT_quick) exit (EXIT_FAILURE); fprintf (stderr, "\n\t-Jx for projection. Scale in INCH/units. Specify one:\n\t -Jx Linear projection\n\t-Jxl Log10 projection\n\t -Jxp x^power projection\n\tUse / to specify separate x/y scaling.\n\t If -JX is used then give axes lengths rather than scales\n\t regular map projections may not work!\n"); GMT_explain_option ('R'); fprintf (stderr, " NB units for y are s or km\n"); fprintf (stderr, " -D to give deviation in X units of plot for 1.0 on scaled trace.\n"); fprintf (stderr, " is single number (applied equally in X and Y directions or /.\n"); fprintf (stderr, " IEEE SEGY file [or standard input] \n\n"); fprintf (stderr, "\n\tOPTIONS:\n"); GMT_explain_option ('E'); GMT_explain_option ('V'); fprintf (stderr, " -C to clip scaled trace excursions at , applied after bias\n"); fprintf (stderr, " -B to bias scaled traces (-B-0.1 subtracts 0.1 from values)\n"); fprintf (stderr," -N to trace normalize the plot\n"); fprintf (stderr," order of operations: [normalize][bias][clip](deviation)\n"); fprintf (stderr," -Z to suppress plotting traces whose rms amplitude is 0 \n"); fprintf (stderr," -F| to fill variable area with shade\n"); fprintf (stderr," only single color for the bitmap though\n"); fprintf (stderr," -I to fill negative rather than positive excursions\n"); fprintf (stderr," -W to plot wiggle trace\n"); fprintf (stderr," must specify either -W or -F\n"); fprintf (stderr," -X multiply trace locations by \n"); fprintf (stderr," -Y to override sample interval\n"); fprintf (stderr," -S to set variable spacing\n"); fprintf (stderr," x,y are (number) for fixed location, c for cdp, o for offset, b for long int at byte n\n"); fprintf (stderr," -L to override number of samples\n"); fprintf (stderr," -M to fix number of traces. Default reads all traces.\n\t\t-M0 will read number in binary header, -Mn will attempt to read only n traces.\n"); fprintf (stderr," -U to apply reduction velocity (-ve removes reduction alreadz present)\n"); fprintf (stderr," -A flips the default byte-swap state (default assumes data have a bigendian byte-order)\n"); GMT_explain_option ('O'); GMT_explain_option ('K'); GMT_explain_option ('P'); exit (EXIT_FAILURE); } if (negative && !do_fill){ /* negative with no fill */ error++; fprintf(stderr,"%s: SYNTAX ERROR: Must specify -F with -I\n", GMT_program); } if (!do_fill && !plot_wig){ /* no plotting specified */ error++; fprintf(stderr,"%s: SYNTAX ERROR: Must specify -F or -W\n", GMT_program); } if (dev_x < 0.0 || dev_y < 0.0){ error++; fprintf(stderr,"%s: SYNTAX ERROR: Must specify a positive deviation\n",GMT_program); } if (project_info.projection >2){ fprintf(stderr,"%s: WARNING: you asked for a non-rectangular projection. \n It will probably still work, but be prepared for problems\n",GMT_program); } if ((xplot_cdp && xplot_offset) || (yplot_cdp && yplot_offset) || (xplot_cdp && byte_x) || (yplot_cdp && byte_y) || (byte_x && xplot_offset) || (byte_y && yplot_offset)){ fprintf(stderr,"%s: SYNTAX ERROR: Can't specify more than one trace location key\n",GMT_program); error++; } if (error) exit (EXIT_FAILURE); if (fpi == NULL) fpi = stdin; GMT_put_history (argc, argv); /* Update .gmtcommands */ /* set up map projection and PS plotting */ GMT_map_setup (w, e, s, n); ps_plotinit (CNULL, gmtdefs.overlay, gmtdefs.page_orientation, gmtdefs.x_origin, gmtdefs.y_origin, gmtdefs.global_x_scale, gmtdefs.global_y_scale, gmtdefs.n_copies, gmtdefs.dpi, GMT_INCH , gmtdefs.paper_width, gmtdefs.page_rgb, GMT_epsinfo (argv[0])); GMT_echo_command (argc, argv); /*if (project_info.three_D) ps_transrotate (-z_project.xmin, -z_project.ymin, 0.0);*/ /* define area for plotting and size of array for bitmap */ xlen = z_project.xmax-z_project.xmin; xpix = xlen*gmtdefs.dpi; /* pixels in x direction */ /*xpix /= 8.0; bm_nx = 1 +(int) xpix;*/ bm_nx = (int) ceil (xpix/8.0); /* store 8 pixels per byte in x direction but must have whole number of bytes per scan */ ylen = z_project.ymax-z_project.ymin; ypix = ylen*gmtdefs.dpi; /* pixels in y direction */ bm_ny = (int) ypix; nm = bm_nx*bm_ny; /* read in reel headers from segy file */ if ((check = get_segy_reelhd (fpi, reelhead)) != TRUE) exit(1); if ((check = get_segy_binhd (fpi, &binhead)) != TRUE) exit(1); if(swap_bytes){ /* this is a little-endian system, and we need to byte-swap ints in the reel header - we only use a few of these*/ if (gmtdefs.verbose) fprintf(stderr, "%s: swapping bytes for ints in the headers\n", GMT_program); binhead.num_traces = GMT_swab2(binhead.num_traces); binhead.nsamp = GMT_swab2(binhead.nsamp); binhead.dsfc = GMT_swab2(binhead.dsfc); binhead.sr = GMT_swab2(binhead.sr); } /* set parameters from the reel headers */ if (!n_traces) n_traces = binhead.num_traces; if (gmtdefs.verbose) fprintf(stderr, "%s: Number of traces in header is %d\n", GMT_program, n_traces); if (!n_sampr){/* number of samples not overridden*/ n_sampr = binhead.nsamp; fprintf(stderr,"%s: Number of samples per trace is %d\n", GMT_program, n_sampr); } else if ((n_sampr != binhead.nsamp) && (binhead.nsamp)) fprintf(stderr,"%s: warning nsampr input %d, nsampr in header %d\n", GMT_program, n_sampr, binhead.nsamp); if (!n_sampr){ /* no number of samples still - a problem! */ fprintf(stderr, "%s: Error, number of samples per trace unknown\n", GMT_program); exit (EXIT_FAILURE); } if(gmtdefs.verbose) fprintf(stderr, "%s: Number of samples is %d\n", GMT_program, n_samp); if(binhead.dsfc != 5) fprintf(stderr, "%s: WARNING data not in IEEE format\n", GMT_program); if (!dz){ dz = binhead.sr; /* sample interval of data (microseconds) */ dz /= 1000000.0; fprintf(stderr,"%s: Sample interval is %f s\n", GMT_program, dz); } else if ((dz != binhead.sr) && (binhead.sr)) /* value in header overridden by input */ fprintf(stderr, "%s: Warning dz input %lf, dz in header %f\n", GMT_program, dz, (float)binhead.sr); if (!dz){ /* still no sample interval at this point is a problem! */ fprintf(stderr, "%s: Error, no sample interval in reel header\n", GMT_program); exit (EXIT_FAILURE); } bitmap = (unsigned char *) GMT_memory (NULL, nm, sizeof (char), "pssegyz"); ix=0; while ((ixsourceToRecDist): header->sourceToRecDist); x0 = (double) offset; } else if (xplot_cdp){ long cdpval = ((swap_bytes)? GMT_swab4(header->cdpEns): header->cdpEns); x0 = (double) cdpval; } else if (byte_x){ /* ugly code - want to get value starting at byte_x of header into a double... */ long plot_loc; head = (char *) header; head2 = (long *) &(head[byte_x]); plot_loc = ((swap_bytes)? GMT_swab4(*head2): *head2); x0 = (double) plot_loc; } else if (fix_x) x0 /= dx; else x0 = (1.0 + (double) ix); /* default x to input trace number */ /* now do same for y */ if (yplot_offset){ /* plot traces by offset, cdp, or input order */ long offset = ((swap_bytes)? GMT_swab4(header->sourceToRecDist): header->sourceToRecDist); y0 = (double) offset; } else if (yplot_cdp){ long cdpval = ((swap_bytes)? GMT_swab4(header->cdpEns): header->cdpEns); y0 = (double) cdpval; } else if (byte_y){ long plot_loc; head = (char *) header; head2 = (long *) &(head[byte_y]); plot_loc = ((swap_bytes)? GMT_swab4(*head2): *head2); y0 = (double) plot_loc; } else if (fix_y) y0 /= dx; else y0 = s / dx; /* default y to s edge of projection */ x0 *= dx; y0 *= dx; /* scale x and y by the input dx scalar */ if (swap_bytes){ /* need to permanently byte-swap some things in the trace header do this after getting the location of where traces are plotted in case the general byte_x case overlaps a defined header in a strange way */ header->sourceToRecDist=GMT_swab4(header->sourceToRecDist); header->sampleLength=GMT_swab2(header->sampleLength); header->num_samps=GMT_swab4(header->num_samps); } if (gmtdefs.verbose) fprintf(stderr, "%s: trace %d at x=%f, y=%f \n", GMT_program, ix+1, x0, y0); if (redvel){ toffset = (float) -(fabs((double)(header->sourceToRecDist))/redvel); if (gmtdefs.verbose) fprintf(stderr, "%s: time shifted by %f\n", GMT_program, toffset); } data = (float *) get_segy_data(fpi, header); /* read a trace */ /* get number of samples in _this_ trace (e.g. OMEGA has strange ideas about SEGY standard) or set to number in reel header */ if ( !(n_samp = samp_rd(header)) ) n_samp = n_sampr; if(swap_bytes){ /* need to swap the order of the bytes in the data even though assuming IEEE format */ int *intdata = (int *) data; for (iz=0; iz clip)) data[iz] = (float)(clip*data[iz]/fabs(data[iz])); /* apply bias and then clip */ } if (!no_zero || scale) plot_trace (data, dz, x0, y0, n_samp, do_fill, negative, plot_wig, toffset, dev_x, dev_y); free (data); free (header); ix++; } /* map_clip_on (-1, -1, -1, 3); /* set a clip at the map boundary since the image space overlaps a little */ ps_imagemask (0.0,0.0,xlen, ylen, bitmap, 8*bm_nx, bm_ny, polarity, shade); /* map_clip_off ();*/ if (fpi != stdin) fclose (fpi); /*ps_rotatetrans (z_project.xmin, z_project.ymin, 0.0);*/ ps_plotend (gmtdefs.last_page); GMT_end (argc, argv); } double rms(float *data, int n_samp) {/* function to return rms amplitude of n_samp values from the array data */ int ix; double sumsq=0.0; for (ix=0; ix=0.)||(data[iz]>=0.))) || (negative && ((data[iz-1]<=0.0)||(data[iz]<=0.0))) ); if (paint_wiggle) shade_bmap (x0, y0, data[iz-1], data[iz], z0, z1, negative, dev_x, dev_y); } z0=z1; } } void wig_bmap(double x0, double y0, float data0, float data1, double z0, double z1, double dev_x, double dev_y) /* apply current sample with all options to bitmap */ { double xp0, xp1, yp0, yp1, slope; int px0, px1, py0, py1, ix, iy; GMT_geoz_to_xy (x0+(double)data0*dev_x, y0+(double)data0*dev_y, z0, &xp0, &yp0); /* returns 2 ends of line segment in plot coords */ GMT_geoz_to_xy (x0+(double)data1*dev_x, y0+(double)data1*dev_y, z1, &xp1, &yp1); slope = (yp1-yp0)/(xp1-xp0); px0 = (int) ((xp0-z_project.xmin)*gmtdefs.dpi); px1 = (int) ((xp1-z_project.xmin)*gmtdefs.dpi); py0 = (int) ((yp0-z_project.ymin)*gmtdefs.dpi); py1 = (int) ((yp1-z_project.ymin)*gmtdefs.dpi); /* now have the pixel locations for the two samples - join with a line..... */ if (fabs(slope) <= 1.0){ /* more pixels needed in x direction */ if (px00.0)&& !negative)) { /* plot from top to zero */ z1=interp; data1=0.0; } else { z0=interp; data0=0.0; } } GMT_geoz_to_xy (x0+(double)data0*dev_x, y0+(double)data0*dev_y, z0, &xp[0], &yp[0]); /* returns 2 ends of line segment in plot coords */ GMT_geoz_to_xy (x0+(double)data1*dev_x, y0+(double)data1*dev_y, z1, &xp[1], &yp[1]); GMT_geoz_to_xy (x0, y0, z0, &xp[2], &yp[2]); /* to get position of zero at each point*/ GMT_geoz_to_xy (x0, y0, z1, &xp[3], &yp[3]); /* to get position of zero at each point*/ /* now have four corner coordinates - need to sort them */ for (ix=0; ixyp[iy]){ temp = yp[iy]; yp[iy]=yp[ix]; yp[ix]=temp; temp = xp[iy]; xp[iy]=xp[ix]; xp[ix]=temp; } /* have to fill the quadrilateral defined by 4 points (now ordered, but care with degenerate cases)*/ slope01 = (xp[1]-xp[0])/(yp[1]-yp[0]); slope02 = (xp[2]-xp[0])/(yp[2]-yp[0]); slope12 = (xp[2]-xp[1])/(yp[2]-yp[1]); slope13 = (xp[3]-xp[1])/(yp[3]-yp[1]); slope23 = (xp[3]-xp[2])/(yp[3]-yp[2]); slope03 = (xp[3]-xp[0])/(yp[3]-yp[0]); if ((yp[0]!=yp[1]) && (yp[2]!=yp[3])){ /* simple case: tri-quad-tri */ shade_tri(xp[0], yp[0], yp[1], slope01, slope02); shade_quad(xp[1], yp[1],xp[0]+slope02*(yp[1]-yp[0]), yp[2], slope02, slope13); shade_tri(xp[3], yp[3], yp[2], slope13, slope23); } if ((yp[0]==yp[1]) && (yp[2]!=yp[3])){ if (xp[0]==xp[1]){ /* two triangles based on yp[1],yp[2]. yp[3] */ shade_tri(xp[1], yp[1], yp[2], slope12, slope13); shade_tri(xp[3], yp[3], yp[2], slope23, slope13); }else{ /* quad based on first 3 points, then tri */ slope0 = (((xp[0]xp[1])&&(xp[3]>xp[2])))*slope03 + (((xp[0]xp[1])&&(xp[2]>xp[3])))*slope02; slope1 = (((xp[1]xp[0]) && (xp[3]>xp[2])))*slope13 + (((xp[1]xp[0])&&(xp[2]>xp[3])))*slope12; slope3 = (((xp[1]xp[0]) && (xp[3]>xp[2])))*slope13 + (((xp[0]xp[1])&&(xp[3]>xp[2])))*slope03; shade_quad(xp[0], yp[0], xp[1], yp[2], slope0, slope1); shade_tri(xp[3], yp[3], yp[2], slope23, slope3); } } if ((yp[0]!=yp[1]) && (yp[2]==yp[3])){ if(xp[2]==xp[3]){/* two triangles based on yp[0],yp[1]. yp[2] */ shade_tri(xp[0], yp[0], yp[1], slope01, slope02); shade_tri(xp[2], yp[2], yp[1], slope12, slope02); }else{ /* triangle based on yp[0], yp[1], then quad based on last 3 points */ slope0 = (((xp[0]xp[1]) && (xp[3]>xp[2])))*slope03 + (((xp[0]xp[1])&&(xp[2]>xp[3])))*slope02; shade_tri(xp[0], yp[0], yp[1], slope01, slope0); slope2 = (((xp[0]xp[1]) && (xp[2]>xp[3])))*slope02 + (((xp[0]xp[1]) && (xp[3]>xp[2])))*slope12; slope3 = (((xp[0]xp[1]) && (xp[3]>xp[2])))*slope03 + (((xp[0]xp[1]) && (xp[2]>xp[3])))*slope13; shade_quad(xp[2], yp[2], xp[3], yp[1], slope2, slope3); } } } void shade_quad (double x0, double y0, double x1, double y_edge, double slope1, double slope0) /* shade a quadrilateral with two sides parallel to x axis, one side at y=y0 with ends at x0 and x1, with lines with gradients slope0 and slope1 respectively */ { int pedge_y, py0, iy, ix1, ix2, ix; if (y0 == y_edge) return; pedge_y = irint((y_edge-z_project.ymin)*gmtdefs.dpi); py0 = irint((y0-z_project.ymin)*gmtdefs.dpi); if (y0edge_y iy %d x1 %d x2 %d\n",iy,x1,x2); */ if (x1= bm_nx-1) || (iy >= bm_ny-1) || (ix < 0) || (iy < 0)) return (-1); /* outside bounds of plot array */ byte = (bm_ny-iy-1)*bm_nx + quot; /* find byte to paint - flip vertical! */ bitmap[byte] = bitmap[byte] | bmask[rem]; return(0); }