This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by R configure 2.6.0, which was generated by GNU Autoconf 2.60. Invocation command line was $ ./configure --enable-R-shlib --with-system-bzlib --with-system-zlib rdocdir=/usr/local/share/doc/R --with-blas=-lblas --with-tcltk --with-jpeglib --with-libpng --with-x --with-system-pcre --x-libraries=/usr/X11R6/lib --x-includes=/usr/X11R6/include --prefix=/usr/local i386-unknown-gnu ## --------- ## ## Platform. ## ## --------- ## hostname = darwintel uname -m = x86 uname -r = 8.0.1 uname -s = Darwin uname -v = Darwin Kernel Version 8.0.1: Fri Apr 29 12:18:40 PDT 2005; root:xnu-792.obj/RELEASE_I386 /usr/bin/uname -p = i386 /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = Mach kernel version: Darwin Kernel Version 8.0.1: Fri Apr 29 12:18:40 PDT 2005; root:xnu-792.obj/RELEASE_I386 Kernel configured for up to 4 processors. 4 processors are physically available. Processor type: pentpro (Intel Pentium Pro) Processors active: 0 1 2 3 Primary memory available: 1023.00 megabytes Default processor set: 141 tasks, 200 threads, 4 processors Load average: 1.20, Mach factor: 3.30 /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /sbin PATH: /usr/sbin PATH: /bin PATH: /sbin PATH: /usr/bin PATH: /usr/sbin PATH: /usr/local/bin PATH: /usr/X11R6/bin PATH: /usr/local/sbin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2350: checking build system type configure:2368: result: i386-unknown-gnu configure:2390: checking host system type configure:2405: result: i386-unknown-gnu configure:2987: checking for pwd configure:3005: found /bin/pwd configure:3018: result: /bin/pwd configure:3026: checking whether builddir is srcdir configure:3034: result: yes configure:3039: checking for working aclocal configure:3043: result: found configure:3052: checking for working autoconf configure:3056: result: found configure:3065: checking for working automake configure:3069: result: found configure:3078: checking for working autoheader configure:3082: result: found configure:3095: checking for gawk configure:3111: found /usr/local/bin/gawk configure:3122: result: gawk configure:3133: checking for grep that handles long lines and -e configure:3207: result: /usr/bin/grep configure:3212: checking for egrep configure:3290: result: /usr/bin/grep -E configure:3295: checking whether ln -s works configure:3299: result: yes configure:3309: checking for i386-unknown-gnu-ranlib configure:3339: result: no configure:3349: checking for ranlib configure:3365: found /usr/bin/ranlib configure:3376: result: ranlib configure:3406: checking for bison configure:3422: found /usr/bin/bison configure:3433: result: bison -y configure:3449: checking for ar configure:3465: found /usr/bin/ar configure:3476: result: ar configure:3503: checking for a BSD-compatible install configure:3559: result: /usr/bin/install -c -o root -g wheel configure:3594: checking for sed configure:3613: found /usr/bin/sed configure:3625: result: /usr/bin/sed configure:3645: checking for less configure:3663: found /usr/bin/less configure:3675: result: /usr/bin/less configure:3698: checking for perl configure:3716: found /usr/bin/perl configure:3728: result: /usr/bin/perl configure:3740: checking whether perl version is at least 5.8.0 configure:3751: result: yes configure:3825: checking for dvips configure:3843: found /usr/local/bin/dvips configure:3855: result: /usr/local/bin/dvips configure:3871: checking for tex configure:3889: found /usr/local/bin/tex configure:3901: result: /usr/local/bin/tex configure:3917: checking for latex configure:3935: found /usr/local/bin/latex configure:3947: result: /usr/local/bin/latex configure:3972: checking for makeindex configure:3990: found /usr/local/bin/makeindex configure:4002: result: /usr/local/bin/makeindex configure:4018: checking for pdftex configure:4036: found /usr/local/bin/pdftex configure:4048: result: /usr/local/bin/pdftex configure:4064: checking for pdflatex configure:4082: found /usr/local/bin/pdflatex configure:4094: result: /usr/local/bin/pdflatex configure:4119: checking for /usr/local/bin/makeinfo configure:4149: result: /usr/local/bin/makeinfo configure:4161: checking whether makeinfo version is at least 4.7 configure:4181: result: yes configure:4198: checking for texi2dvi configure:4216: found /usr/bin/texi2dvi configure:4228: result: /usr/bin/texi2dvi configure:4302: checking for unzip configure:4320: found /usr/bin/unzip configure:4332: result: /usr/bin/unzip configure:4348: checking for zip configure:4366: found /usr/bin/zip configure:4378: result: /usr/bin/zip configure:4394: checking for gzip configure:4412: found /usr/bin/gzip configure:4424: result: /usr/bin/gzip configure:4442: checking for firefox configure:4475: result: no configure:4442: checking for mozilla configure:4460: found /usr/local/bin/mozilla configure:4472: result: /usr/local/bin/mozilla configure:4489: result: using default browser ... /usr/local/bin/mozilla configure:4499: checking for acroread configure:4517: found /usr/local/bin/acroread configure:4529: result: /usr/local/bin/acroread configure:4556: checking for i386-unknown-gnu-gcc configure:4583: result: cc configure:4861: checking for C compiler version configure:4868: cc --version >&5 cc (GCC) 3.3 20030304 (Apple Computer, Inc. build 1809) Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4871: $? = 0 configure:4878: cc -v >&5 Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) configure:4881: $? = 0 configure:4888: cc -V >&5 cc: `-V' option must have argument configure:4891: $? = 1 configure:4914: checking for C compiler default output file name configure:4941: cc -fno-common -I/usr/local/include -L/usr/local/lib conftest.c >&5 configure:4944: $? = 0 configure:4990: result: a.out configure:4995: checking whether the C compiler works configure:5005: ./a.out configure:5008: $? = 0 configure:5025: result: yes configure:5032: checking whether we are cross compiling configure:5034: result: no configure:5037: checking for suffix of executables configure:5044: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c >&5 configure:5047: $? = 0 configure:5071: result: configure:5077: checking for suffix of object files configure:5103: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:5106: $? = 0 configure:5129: result: o configure:5133: checking whether we are using the GNU C compiler configure:5162: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:5168: $? = 0 configure:5175: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:5178: $? = 0 configure:5185: test -s conftest.o configure:5188: $? = 0 configure:5202: result: yes configure:5207: checking whether cc accepts -g configure:5237: cc -c -g -I/usr/local/include conftest.c >&5 configure:5243: $? = 0 configure:5250: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:5253: $? = 0 configure:5260: test -s conftest.o configure:5263: $? = 0 configure:5393: result: yes configure:5410: checking for cc option to accept ISO C89 configure:5484: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:5490: $? = 0 configure:5497: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:5500: $? = 0 configure:5507: test -s conftest.o configure:5510: $? = 0 configure:5530: result: none needed configure:5555: checking how to run the C preprocessor configure:5595: cc -E -I/usr/local/include conftest.c configure:5601: $? = 0 configure:5639: cc -E -I/usr/local/include conftest.c conftest.c:16:28: ac_nonexistent.h: No such file or directory configure:5645: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:5685: result: cc -E configure:5714: cc -E -I/usr/local/include conftest.c configure:5720: $? = 0 configure:5758: cc -E -I/usr/local/include conftest.c conftest.c:16:28: ac_nonexistent.h: No such file or directory configure:5764: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:5810: checking whether cc needs -traditional conftest.c:16:20: termio.h: No such file or directory configure:5852: result: no configure:5864: checking how to run the C preprocessor configure:5994: result: cc -E configure:6023: cc -E -I/usr/local/include conftest.c configure:6029: $? = 0 configure:6067: cc -E -I/usr/local/include conftest.c conftest.c:16:28: ac_nonexistent.h: No such file or directory configure:6073: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:6163: result: defining F77 to be gfortran42 configure:6238: checking for i386-unknown-gnu-g77 configure:6265: result: gfortran42 configure:6339: checking for Fortran 77 compiler version configure:6346: gfortran42 --version >&5 sh: -c: line 1: syntax error near unexpected token `|' sh: -c: line 1: `/usr/local/bin/gfortran42 -1 < | f2c -f | /usr/local/bin/gfortran42 -2 > /tmp/' cc (GCC) 3.3 20030304 (Apple Computer, Inc. build 1809) Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6349: $? = 0 configure:6356: gfortran42 -v >&5 sh: -c: line 1: syntax error near unexpected token `|' sh: -c: line 1: `/usr/local/bin/gfortran42 -1 < | f2c -f | /usr/local/bin/gfortran42 -2 > /tmp/' Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) cc: /tmp/: linker input file unused because linking not done configure:6359: $? = 0 configure:6366: gfortran42 -V >&5 sh: -c: line 1: syntax error near unexpected token `|' sh: -c: line 1: `/usr/local/bin/gfortran42 -1 < | f2c -f | /usr/local/bin/gfortran42 -2 > /tmp/' cc: `-V' must come at the start of the command line configure:6369: $? = 0 configure:6377: checking whether we are using the GNU Fortran 77 compiler configure:6396: gfortran42 -c conftest.F >&5 Error on line 2: Bad # line: "#ifndef __GNUC__" MAIN main: Error on line 4: Bad # line: "#endif" Error on line 3: unclassifiable statement (starts "chokeme") cc: /tmp/conftest.F: Fortran compiler not installed on this system configure:6402: $? = 0 configure:6409: test -z "$ac_f77_werror_flag" || test ! -s conftest.err configure:6412: $? = 0 configure:6419: test -s conftest.o configure:6422: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:6436: result: no configure:6442: checking whether gfortran42 accepts -g configure:6459: gfortran42 -c -g conftest.f >&5 MAIN main: configure:6465: $? = 0 configure:6472: test -z "$ac_f77_werror_flag" || test ! -s conftest.err configure:6475: $? = 0 configure:6482: test -s conftest.o configure:6485: $? = 0 configure:6498: result: yes configure:6645: checking for C++ compiler version configure:6652: c++ --version >&5 c++ (GCC) 3.3 20030304 (Apple Computer, Inc. build 1809) Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6655: $? = 0 configure:6662: c++ -v >&5 Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) configure:6665: $? = 0 configure:6672: c++ -V >&5 c++: `-V' option must have argument configure:6675: $? = 1 configure:6678: checking whether we are using the GNU C++ compiler configure:6707: c++ -c -fno-common -I/usr/local/include conftest.cpp >&5 configure:6713: $? = 0 configure:6720: test -z "$ac_cxx_werror_flag" || test ! -s conftest.err configure:6723: $? = 0 configure:6730: test -s conftest.o configure:6733: $? = 0 configure:6747: result: yes configure:6752: checking whether c++ accepts -g configure:6782: c++ -c -g -I/usr/local/include conftest.cpp >&5 configure:6788: $? = 0 configure:6795: test -z "$ac_cxx_werror_flag" || test ! -s conftest.err configure:6798: $? = 0 configure:6805: test -s conftest.o configure:6808: $? = 0 configure:6938: result: yes configure:6966: checking how to run the C++ preprocessor configure:7002: c++ -E -I/usr/local/include conftest.cpp configure:7008: $? = 0 configure:7046: c++ -E -I/usr/local/include conftest.cpp conftest.cpp:16:28: ac_nonexistent.h: No such file or directory configure:7052: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:7092: result: c++ -E configure:7121: c++ -E -I/usr/local/include conftest.cpp configure:7127: $? = 0 configure:7165: c++ -E -I/usr/local/include conftest.cpp conftest.cpp:16:28: ac_nonexistent.h: No such file or directory configure:7171: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | #include configure:7215: checking whether __attribute__((visibility())) is supported configure:7226: cc -Werror -S conftest.c -o conftest.s 1>&5 conftest.c:1: warning: visibility attribute not supported in this configuration; ignored configure:7229: $? = 1 configure:7238: result: no configure:7251: checking whether cc accepts -fvisibility configure:7277: cc -c -fno-common -fvisibility=hidden -I/usr/local/include conftest.c >&5 cc1: error: unrecognized option `-fvisibility=hidden' configure:7283: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:7315: result: no configure:7340: checking whether gfortran42 accepts -fvisibility configure:7356: gfortran42 -c -g -fvisibility=hidden conftest.f >&5 MAIN main: cc1: error: unrecognized option `-fvisibility=hidden' configure:7362: $? = 0 configure:7369: test -z "$ac_f77_werror_flag" || test ! -s conftest.err configure:7372: $? = 0 configure:7379: test -s conftest.o configure:7382: $? = 1 configure: failed program was: | program main | | end configure:7394: result: no configure:7434: checking for i386-unknown-gnu-gcc configure:7464: result: no configure:7434: checking for i386-unknown-gnu-objcc configure:7464: result: no configure:7434: checking for i386-unknown-gnu-objc configure:7464: result: no configure:7434: checking for i386-unknown-gnu-cc configure:7464: result: no configure:7434: checking for i386-unknown-gnu-CC configure:7464: result: no configure:7478: checking for gcc configure:7494: found /usr/bin/gcc configure:7505: result: gcc configure:7534: checking for Objective C compiler version configure:7541: gcc --version >&5 gcc (GCC) 3.3 20030304 (Apple Computer, Inc. build 1809) Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:7544: $? = 0 configure:7551: gcc -v >&5 Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) configure:7554: $? = 0 configure:7561: gcc -V >&5 gcc: `-V' option must have argument configure:7564: $? = 1 configure:7567: checking whether we are using the GNU Objective C compiler configure:7596: gcc -c -I/usr/local/include conftest.m >&5 configure:7602: $? = 0 configure:7609: test -z "$ac_objc_werror_flag" || test ! -s conftest.err configure:7612: $? = 0 configure:7619: test -s conftest.o configure:7622: $? = 0 configure:7636: result: yes configure:7641: checking whether gcc accepts -g configure:7671: gcc -c -g -I/usr/local/include conftest.m >&5 configure:7677: $? = 0 configure:7684: test -z "$ac_objc_werror_flag" || test ! -s conftest.err configure:7687: $? = 0 configure:7694: test -s conftest.o configure:7697: $? = 0 configure:7827: result: yes configure:7880: gcc -c -g -O2 -I/usr/local/include conftest.m >&5 conftest.m: In function `main': conftest.m:21: error: `id' undeclared (first use in this function) conftest.m:21: error: (Each undeclared identifier is reported only once conftest.m:21: error: for each function it appears in.) conftest.m:21: error: parse error before "foo" configure:7886: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | /* end confdefs.h. */ | | int | main () | { | id foo; | ; | return 0; | } configure:7928: checking for cached ObjC++ compiler configure:7934: result: none configure:7980: checking whether c++ can compile ObjC++ running: c++ -c conftest.mm -I/usr/local/include configure:8006: result: yes configure:8057: checking for Objective C++ compiler configure:8063: result: c++ configure:8158: checking for a sed that does not truncate output configure:8212: result: /usr/local/bin/sed configure:8226: checking for ld used by cc configure:8293: result: /usr/bin/ld configure:8302: checking if the linker (/usr/bin/ld) is GNU ld configure:8317: result: no configure:8322: checking for /usr/bin/ld option to reload object files configure:8329: result: -r configure:8338: checking for BSD-compatible nm configure:8380: result: nm configure:8384: checking how to recognise dependent libraries configure:8567: result: pass_all configure:8788: checking for ANSI C header files configure:8818: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:8824: $? = 0 configure:8831: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:8834: $? = 0 configure:8841: test -s conftest.o configure:8844: $? = 0 configure:8937: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c >&5 configure:8940: $? = 0 configure:8946: ./conftest configure:8949: $? = 0 configure:8966: result: yes configure:8990: checking for sys/types.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for sys/stat.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for stdlib.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for string.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for memory.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for strings.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for inttypes.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for stdint.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:8990: checking for unistd.h configure:9011: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9017: $? = 0 configure:9024: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9027: $? = 0 configure:9034: test -s conftest.o configure:9037: $? = 0 configure:9050: result: yes configure:9077: checking dlfcn.h usability configure:9094: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9100: $? = 0 configure:9107: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:9110: $? = 0 configure:9117: test -s conftest.o configure:9120: $? = 0 configure:9131: result: yes configure:9135: checking dlfcn.h presence configure:9150: cc -E -I/usr/local/include conftest.c configure:9156: $? = 0 configure:9177: result: yes configure:9210: checking for dlfcn.h configure:9218: result: yes configure:9237: checking the maximum length of command line arguments configure:9302: result: configure:9313: checking command to parse nm output from cc object configure:9402: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9405: $? = 0 configure:9409: nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\(\)\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2\3 \3/p' \> conftest.nm configure:9412: $? = 0 cannot find nm_test_var in conftest.nm configure:9402: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:9405: $? = 0 configure:9409: nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\(_\)\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2\3 \3/p' \> conftest.nm configure:9412: $? = 0 configure:9464: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c conftstm.o >&5 configure:9467: $? = 0 configure:9505: result: ok configure:9509: checking for objdir configure:9524: result: .libs configure:9576: checking for i386-unknown-gnu-ar configure:9603: result: ar configure:9672: checking for i386-unknown-gnu-ranlib configure:9699: result: ranlib configure:9768: checking for i386-unknown-gnu-strip configure:9798: result: no configure:9808: checking for strip configure:9824: found /usr/bin/strip configure:9835: result: strip configure:10111: checking if cc static flag works configure:10134: result: yes configure:10156: checking if cc supports -fno-rtti -fno-exceptions configure:10177: cc -c -fno-common -I/usr/local/include -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: "-frtti" is valid for C++ but not for C/ObjC configure:10181: $? = 0 configure:10189: result: no configure:10204: checking for cc option to produce PIC configure:10381: result: -fPIC configure:10389: checking if cc PIC flag -fPIC works configure:10410: cc -c -fno-common -I/usr/local/include -fPIC -DPIC conftest.c >&5 configure:10414: $? = 0 configure:10422: result: yes configure:10446: checking if cc supports -c -o file.o configure:10470: cc -c -fno-common -I/usr/local/include -o out/conftest2.o conftest.c >&5 configure:10474: $? = 0 configure:10491: result: yes configure:10517: checking whether the cc linker (/usr/bin/ld) supports shared libraries configure:11393: result: no configure:11464: checking dynamic linker characteristics configure:12004: result: gnu ld.so configure:12008: checking how to hardcode library paths into programs configure:12033: result: immediate configure:12047: checking whether stripping libraries is possible configure:12068: result: no configure:12961: checking if libtool supports shared libraries configure:12963: result: no configure:12966: checking whether to build shared libraries configure:13024: result: no configure:13027: checking whether to build static libraries configure:13031: result: yes configure:13123: creating libtool configure:13671: checking for ld used by c++ configure:13738: result: /usr/bin/ld configure:13747: checking if the linker (/usr/bin/ld) is GNU ld configure:13762: result: no configure:13813: checking whether the c++ linker (/usr/bin/ld) supports shared libraries configure:14669: result: yes configure:14691: c++ -c -fno-common -I/usr/local/include conftest.cc >&5 configure:14694: $? = 0 configure:14790: checking for c++ option to produce PIC configure:15042: result: -fPIC configure:15050: checking if c++ PIC flag -fPIC works configure:15071: c++ -c -fno-common -I/usr/local/include -fPIC -DPIC conftest.cc >&5 configure:15075: $? = 0 configure:15083: result: yes configure:15107: checking if c++ supports -c -o file.o configure:15131: c++ -c -fno-common -I/usr/local/include -o out/conftest2.o conftest.cc >&5 configure:15135: $? = 0 configure:15152: result: yes configure:15178: checking whether the c++ linker (/usr/bin/ld) supports shared libraries configure:15203: result: yes configure:15274: checking dynamic linker characteristics configure:15814: result: gnu ld.so configure:15818: checking how to hardcode library paths into programs configure:15843: result: immediate configure:15857: checking whether stripping libraries is possible configure:15878: result: no configure:17248: checking if libtool supports shared libraries configure:17250: result: no configure:17253: checking whether to build shared libraries configure:17271: result: no configure:17274: checking whether to build static libraries configure:17278: result: yes configure:17290: checking for gfortran42 option to produce PIC configure:17467: result: -fPIC configure:17475: checking if gfortran42 PIC flag -fPIC works configure:17496: gfortran42 -c -g -fPIC conftest.f >&5 t: configure:17500: $? = 0 configure:17508: result: no configure:17532: checking if gfortran42 supports -c -o file.o configure:17556: gfortran42 -c -g -o out/conftest2.o conftest.f >&5 t: configure:17560: $? = 0 configure:17577: result: no configure:17603: checking whether the gfortran42 linker (/usr/bin/ld) supports shared libraries configure:18459: result: no configure:18530: checking dynamic linker characteristics configure:19070: result: gnu ld.so configure:19074: checking how to hardcode library paths into programs configure:19099: result: immediate configure:19113: checking whether stripping libraries is possible configure:19134: result: no configure:23597: checking for cos in -lm configure:23632: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5 conftest.c:35: warning: conflicting types for built-in function `cos' configure:23638: $? = 0 configure:23645: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:23648: $? = 0 configure:23655: test -s conftest configure:23658: $? = 0 configure:23672: result: yes configure:23686: checking for sin in -lm configure:23721: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -lm >&5 conftest.c:35: warning: conflicting types for built-in function `sin' configure:23727: $? = 0 configure:23734: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:23737: $? = 0 configure:23744: test -s conftest configure:23747: $? = 0 configure:23761: result: yes configure:23972: checking for dlopen in -ldl configure:24007: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 ld: warning multiple definitions of symbol _dladdr /usr/local/lib/libdl.dylib(dlfcn.o) definition of _dladdr /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) definition of _dladdr ld: warning multiple definitions of symbol _dlclose /usr/local/lib/libdl.dylib(dlfcn.o) definition of _dlclose /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) definition of _dlclose ld: warning multiple definitions of symbol _dlerror /usr/local/lib/libdl.dylib(dlfcn.o) definition of _dlerror /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) definition of _dlerror ld: warning multiple definitions of symbol _dlopen /usr/local/lib/libdl.dylib(dlfcn.o) definition of _dlopen /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) definition of _dlopen ld: warning multiple definitions of symbol _dlsym /usr/local/lib/libdl.dylib(dlfcn.o) definition of _dlsym /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) definition of _dlsym configure:24013: $? = 0 configure:24020: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:24023: $? = 0 configure:24030: test -s conftest configure:24033: $? = 0 configure:24047: result: yes configure:24079: checking readline/history.h usability configure:24096: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:24102: $? = 0 configure:24109: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:24112: $? = 0 configure:24119: test -s conftest.o configure:24122: $? = 0 configure:24133: result: yes configure:24137: checking readline/history.h presence configure:24152: cc -E -I/usr/local/include conftest.c configure:24158: $? = 0 configure:24179: result: yes configure:24212: checking for readline/history.h configure:24220: result: yes configure:24079: checking readline/readline.h usability configure:24096: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:24102: $? = 0 configure:24109: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:24112: $? = 0 configure:24119: test -s conftest.o configure:24122: $? = 0 configure:24133: result: yes configure:24137: checking readline/readline.h presence configure:24152: cc -E -I/usr/local/include conftest.c configure:24158: $? = 0 configure:24179: result: yes configure:24212: checking for readline/readline.h configure:24220: result: yes configure:24238: checking for rl_callback_read_char in -lreadline configure:24273: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5 configure:24279: $? = 0 configure:24286: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:24289: $? = 0 configure:24296: test -s conftest configure:24299: $? = 0 configure:24313: result: yes configure:24667: checking for history_truncate_file configure:24723: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -lreadline >&5 ld: Undefined symbols: _history_truncate_file configure:24729: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | /* end confdefs.h. */ | /* Define history_truncate_file to an innocuous variant, in case declares history_truncate_file. | For example, HP-UX 11i declares gettimeofday. */ | #define history_truncate_file innocuous_history_truncate_file | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char history_truncate_file (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef history_truncate_file | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char history_truncate_file (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_history_truncate_file || defined __stub___history_truncate_file | choke me | #endif | | int | main () | { | return history_truncate_file (); | ; | return 0; | } configure:24763: result: no configure:24784: checking whether rl_completion_matches exists and is declared configure:24816: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used ld: Undefined symbols: _rl_completion_matches configure:24822: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | /* end confdefs.h. */ | #include | #include | | | int | main () | { | #ifndef rl_completion_matches | char *p = (char *) rl_completion_matches; | #endif | | ; | return 0; | } configure:24856: result: no configure:24872: checking for ANSI C header files configure:25050: result: yes configure:25060: checking whether time.h and sys/time.h may both be included configure:25090: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25096: $? = 0 configure:25103: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25106: $? = 0 configure:25113: test -s conftest.o configure:25116: $? = 0 configure:25128: result: yes configure:25146: checking for dirent.h that defines DIR configure:25175: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25181: $? = 0 configure:25188: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25191: $? = 0 configure:25198: test -s conftest.o configure:25201: $? = 0 configure:25214: result: yes configure:25227: checking for library containing opendir configure:25268: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used configure:25274: $? = 0 configure:25281: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25284: $? = 0 configure:25291: test -s conftest configure:25294: $? = 0 configure:25318: result: none required configure:25428: checking for sys/wait.h that is POSIX.1 compatible configure:25464: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25470: $? = 0 configure:25477: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25480: $? = 0 configure:25487: test -s conftest.o configure:25490: $? = 0 configure:25502: result: yes configure:25559: checking arpa/inet.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking arpa/inet.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for arpa/inet.h configure:25700: result: yes configure:25559: checking dl.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c:71:16: dl.h: No such file or directory configure:25582: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | /* end confdefs.h. */ | #include | #if HAVE_SYS_TYPES_H | # include | #endif | #if HAVE_SYS_STAT_H | # include | #endif | #if STDC_HEADERS | # include | # include | #else | # if HAVE_STDLIB_H | # include | # endif | #endif | #if HAVE_STRING_H | # if !STDC_HEADERS && HAVE_MEMORY_H | # include | # endif | # include | #endif | #if HAVE_STRINGS_H | # include | #endif | #if HAVE_INTTYPES_H | # include | #endif | #if HAVE_STDINT_H | # include | #endif | #if HAVE_UNISTD_H | # include | #endif | #include configure:25613: result: no configure:25617: checking dl.h presence configure:25632: cc -E -I/usr/local/include conftest.c conftest.c:38:16: dl.h: No such file or directory configure:25638: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | /* end confdefs.h. */ | #include configure:25659: result: no configure:25692: checking for dl.h configure:25700: result: no configure:25549: checking for dlfcn.h configure:25555: result: yes configure:25559: checking elf.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c:72:17: elf.h: No such file or directory configure:25582: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include | #if HAVE_SYS_TYPES_H | # include | #endif | #if HAVE_SYS_STAT_H | # include | #endif | #if STDC_HEADERS | # include | # include | #else | # if HAVE_STDLIB_H | # include | # endif | #endif | #if HAVE_STRING_H | # if !STDC_HEADERS && HAVE_MEMORY_H | # include | # endif | # include | #endif | #if HAVE_STRINGS_H | # include | #endif | #if HAVE_INTTYPES_H | # include | #endif | #if HAVE_STDINT_H | # include | #endif | #if HAVE_UNISTD_H | # include | #endif | #include configure:25613: result: no configure:25617: checking elf.h presence configure:25632: cc -E -I/usr/local/include conftest.c conftest.c:39:17: elf.h: No such file or directory configure:25638: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include configure:25659: result: no configure:25692: checking for elf.h configure:25700: result: no configure:25559: checking fcntl.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking fcntl.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for fcntl.h configure:25700: result: yes configure:25559: checking floatingpoint.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c:73:27: floatingpoint.h: No such file or directory configure:25582: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | /* end confdefs.h. */ | #include | #if HAVE_SYS_TYPES_H | # include | #endif | #if HAVE_SYS_STAT_H | # include | #endif | #if STDC_HEADERS | # include | # include | #else | # if HAVE_STDLIB_H | # include | # endif | #endif | #if HAVE_STRING_H | # if !STDC_HEADERS && HAVE_MEMORY_H | # include | # endif | # include | #endif | #if HAVE_STRINGS_H | # include | #endif | #if HAVE_INTTYPES_H | # include | #endif | #if HAVE_STDINT_H | # include | #endif | #if HAVE_UNISTD_H | # include | #endif | #include configure:25613: result: no configure:25617: checking floatingpoint.h presence configure:25632: cc -E -I/usr/local/include conftest.c conftest.c:40:27: floatingpoint.h: No such file or directory configure:25638: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | /* end confdefs.h. */ | #include configure:25659: result: no configure:25692: checking for floatingpoint.h configure:25700: result: no configure:25559: checking fpu_control.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c:73:25: fpu_control.h: No such file or directory configure:25582: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | /* end confdefs.h. */ | #include | #if HAVE_SYS_TYPES_H | # include | #endif | #if HAVE_SYS_STAT_H | # include | #endif | #if STDC_HEADERS | # include | # include | #else | # if HAVE_STDLIB_H | # include | # endif | #endif | #if HAVE_STRING_H | # if !STDC_HEADERS && HAVE_MEMORY_H | # include | # endif | # include | #endif | #if HAVE_STRINGS_H | # include | #endif | #if HAVE_INTTYPES_H | # include | #endif | #if HAVE_STDINT_H | # include | #endif | #if HAVE_UNISTD_H | # include | #endif | #include configure:25613: result: no configure:25617: checking fpu_control.h presence configure:25632: cc -E -I/usr/local/include conftest.c conftest.c:40:25: fpu_control.h: No such file or directory configure:25638: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | /* end confdefs.h. */ | #include configure:25659: result: no configure:25692: checking for fpu_control.h configure:25700: result: no configure:25559: checking glob.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking glob.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for glob.h configure:25700: result: yes configure:25559: checking grp.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking grp.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for grp.h configure:25700: result: yes configure:25559: checking limits.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking limits.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for limits.h configure:25700: result: yes configure:25559: checking locale.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking locale.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for locale.h configure:25700: result: yes configure:25559: checking netdb.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking netdb.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for netdb.h configure:25700: result: yes configure:25559: checking netinet/in.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking netinet/in.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for netinet/in.h configure:25700: result: yes configure:25559: checking pwd.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking pwd.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for pwd.h configure:25700: result: yes configure:25559: checking stdbool.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking stdbool.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for stdbool.h configure:25700: result: yes configure:25549: checking for strings.h configure:25555: result: yes configure:25559: checking sys/param.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/param.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/param.h configure:25700: result: yes configure:25559: checking sys/select.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/select.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/select.h configure:25700: result: yes configure:25559: checking sys/socket.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/socket.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/socket.h configure:25700: result: yes configure:25549: checking for sys/stat.h configure:25555: result: yes configure:25559: checking sys/resource.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/resource.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/resource.h configure:25700: result: yes configure:25559: checking sys/time.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/time.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/time.h configure:25700: result: yes configure:25559: checking sys/times.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/times.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/times.h configure:25700: result: yes configure:25559: checking sys/utsname.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking sys/utsname.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for sys/utsname.h configure:25700: result: yes configure:25559: checking time.h usability configure:25576: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25582: $? = 0 configure:25589: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25592: $? = 0 configure:25599: test -s conftest.o configure:25602: $? = 0 configure:25613: result: yes configure:25617: checking time.h presence configure:25632: cc -E -I/usr/local/include conftest.c configure:25638: $? = 0 configure:25659: result: yes configure:25692: checking for time.h configure:25700: result: yes configure:25549: checking for unistd.h configure:25555: result: yes configure:25736: checking errno.h usability configure:25753: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25759: $? = 0 configure:25766: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25769: $? = 0 configure:25776: test -s conftest.o configure:25779: $? = 0 configure:25790: result: yes configure:25794: checking errno.h presence configure:25809: cc -E -I/usr/local/include conftest.c configure:25815: $? = 0 configure:25836: result: yes configure:25869: checking for errno.h configure:25877: result: yes configure:25726: checking for inttypes.h configure:25732: result: yes configure:25736: checking stdarg.h usability configure:25753: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25759: $? = 0 configure:25766: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25769: $? = 0 configure:25776: test -s conftest.o configure:25779: $? = 0 configure:25790: result: yes configure:25794: checking stdarg.h presence configure:25809: cc -E -I/usr/local/include conftest.c configure:25815: $? = 0 configure:25836: result: yes configure:25869: checking for stdarg.h configure:25877: result: yes configure:25726: checking for stdint.h configure:25732: result: yes configure:25726: checking for string.h configure:25732: result: yes configure:25897: checking whether setjmp.h is POSIX.1 compatible configure:25925: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:25931: $? = 0 configure:25938: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:25941: $? = 0 configure:25948: test -s conftest.o configure:25951: $? = 0 configure:25963: result: yes configure:25965: checking whether sigsetjmp is declared configure:25996: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26002: $? = 0 configure:26009: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26012: $? = 0 configure:26019: test -s conftest.o configure:26022: $? = 0 configure:26034: result: yes configure:26050: checking whether siglongjmp is declared configure:26081: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26087: $? = 0 configure:26094: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26097: $? = 0 configure:26104: test -s conftest.o configure:26107: $? = 0 configure:26119: result: yes configure:26151: checking for GNU C library with version >= 2 configure:26178: result: no configure:26191: checking return type of signal handlers configure:26219: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c: In function `main': conftest.c:73: error: void value not ignored as it ought to be configure:26225: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_PWD_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | return *(signal (0, 0)) (0) == 1; | ; | return 0; | } configure:26257: result: void configure:26265: checking for pid_t configure:26295: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26301: $? = 0 configure:26308: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26311: $? = 0 configure:26318: test -s conftest.o configure:26321: $? = 0 configure:26333: result: yes configure:26345: checking for size_t configure:26375: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26381: $? = 0 configure:26388: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26391: $? = 0 configure:26398: test -s conftest.o configure:26401: $? = 0 configure:26413: result: yes configure:26425: checking whether SIZE_MAX is declared configure:26468: cc -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 conftest.c: In function `main': conftest.c:83: error: `SIZE_MAX' undeclared (first use in this function) conftest.c:83: error: (Each undeclared identifier is reported only once conftest.c:83: error: for each function it appears in.) configure:26471: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_PWD_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define RETSIGTYPE void | /* end confdefs.h. */ | | #include | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_LIMITS_H | # include | #endif | | int | main() { | #ifndef SIZE_MAX | char *p = (char *) SIZE_MAX; | #endif | | ; | return 0; | } | configure:26496: result: no configure:26506: checking for blkcnt_t configure:26536: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26542: $? = 0 configure:26549: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26552: $? = 0 configure:26559: test -s conftest.o configure:26562: $? = 0 configure:26574: result: yes configure:26588: checking for type of socket length configure:26624: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26630: $? = 0 configure:26637: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26640: $? = 0 configure:26647: test -s conftest.o configure:26650: $? = 0 configure:26675: result: socklen_t * configure:26684: checking for stack_t configure:26715: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26721: $? = 0 configure:26728: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26731: $? = 0 configure:26738: test -s conftest.o configure:26741: $? = 0 configure:26753: result: yes configure:26769: checking for intptr_t configure:26805: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26811: $? = 0 configure:26818: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26821: $? = 0 configure:26828: test -s conftest.o configure:26831: $? = 0 configure:26843: result: yes configure:26853: checking for uintptr_t configure:26889: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26895: $? = 0 configure:26902: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26905: $? = 0 configure:26912: test -s conftest.o configure:26915: $? = 0 configure:26927: result: yes configure:26945: checking whether byte ordering is bigendian configure:26977: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:26983: $? = 0 configure:26990: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:26993: $? = 0 configure:27000: test -s conftest.o configure:27003: $? = 0 configure:27032: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c: In function `main': conftest.c:79: error: `not' undeclared (first use in this function) conftest.c:79: error: (Each undeclared identifier is reported only once conftest.c:79: error: for each function it appears in.) conftest.c:79: error: parse error before "big" configure:27038: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_PWD_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define RETSIGTYPE void | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:27212: result: no configure:27231: checking for an ANSI C-conforming const configure:27306: cc -c -fno-common -I/usr/local/include conftest.c >&5 configure:27312: $? = 0 configure:27319: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:27322: $? = 0 configure:27329: test -s conftest.o configure:27332: $? = 0 configure:27344: result: yes configure:27356: checking for cc option to accept ISO C99 configure:27486: cc -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c:93: error: parse error before "text" conftest.c: In function `test_restrict': conftest.c:98: error: `for' loop initial declaration used outside C99 mode conftest.c:98: error: `text' undeclared (first use in this function) conftest.c:98: error: (Each undeclared identifier is reported only once conftest.c:98: error: for each function it appears in.) conftest.c: In function `main': conftest.c:149: error: syntax error before "newvar" conftest.c:158: error: `for' loop initial declaration used outside C99 mode conftest.c:174: error: `newvar' undeclared (first use in this function) configure:27492: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_PWD_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define RETSIGTYPE void | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | /* end confdefs.h. */ | #include | #include | #include | #include | #include | | struct incomplete_array | { | int datasize; | double data[]; | }; | | struct named_init { | int number; | const wchar_t *name; | double average; | }; | | typedef const char *ccp; | | static inline int | test_restrict(ccp restrict text) | { | // See if C++-style comments work. | // Iterate through items via the restricted pointer. | // Also check for declarations in for loops. | for (unsigned int i = 0; *(text+i) != '\0'; ++i) | continue; | return 0; | } | | // Check varargs and va_copy work. | static void | test_varargs(const char *format, ...) | { | va_list args; | va_start(args, format); | va_list args_copy; | va_copy(args_copy, args); | | const char *str; | int number; | float fnumber; | | while (*format) | { | switch (*format++) | { | case 's': // string | str = va_arg(args_copy, const char *); | break; | case 'd': // int | number = va_arg(args_copy, int); | break; | case 'f': // float | fnumber = (float) va_arg(args_copy, double); | break; | default: | break; | } | } | va_end(args_copy); | va_end(args); | } | | int | main () | { | | // Check bool and long long datatypes. | _Bool success = false; | long long int bignum = -1234567890LL; | unsigned long long int ubignum = 1234567890uLL; | | // Check restrict. | if (test_restrict("String literal") != 0) | success = true; | char *restrict newvar = "Another string"; | | // Check varargs. | test_varargs("s, d' f .", "string", 65, 34.234); | | // Check incomplete arrays work. | struct incomplete_array *ia = | malloc(sizeof(struct incomplete_array) + (sizeof(double) * 10)); | ia->datasize = 10; | for (int i = 0; i < ia->datasize; ++i) | ia->data[i] = (double) i * 1.234; | | // Check named initialisers. | struct named_init ni = { | .number = 34, | .name = L"Test wide string", | .average = 543.34343, | }; | | ni.number = 58; | | int dynamic_array[ni.number]; | dynamic_array[43] = 543; | | // work around unused variable warnings | return bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x'; | | ; | return 0; | } configure:27486: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:27492: $? = 0 configure:27499: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:27502: $? = 0 configure:27509: test -s conftest.o configure:27512: $? = 0 configure:27539: result: -std=gnu99 configure:27686: checking for cc -std=gnu99 option to accept ISO Standard C configure:27697: result: -std=gnu99 configure:27702: checking for inline configure:27727: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:27733: $? = 0 configure:27740: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:27743: $? = 0 configure:27750: test -s conftest.o configure:27753: $? = 0 configure:27767: result: inline configure:27781: checking for int configure:27811: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:27817: $? = 0 configure:27824: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:27827: $? = 0 configure:27834: test -s conftest.o configure:27837: $? = 0 configure:27849: result: yes configure:27852: checking size of int configure:28240: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) configure:28243: $? = 0 configure:28249: ./conftest configure:28252: $? = 0 configure:28274: result: 4 configure:28291: checking for long configure:28321: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:28327: $? = 0 configure:28334: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:28337: $? = 0 configure:28344: test -s conftest.o configure:28347: $? = 0 configure:28359: result: yes configure:28362: checking size of long configure:28750: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) configure:28753: $? = 0 configure:28759: ./conftest configure:28762: $? = 0 configure:28784: result: 4 configure:28791: checking for long long configure:28821: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:28827: $? = 0 configure:28834: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:28837: $? = 0 configure:28844: test -s conftest.o configure:28847: $? = 0 configure:28859: result: yes configure:28862: checking size of long long configure:29250: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) configure:29253: $? = 0 configure:29259: ./conftest configure:29262: $? = 0 configure:29284: result: 8 configure:29291: checking for double configure:29321: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:29327: $? = 0 configure:29334: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:29337: $? = 0 configure:29344: test -s conftest.o configure:29347: $? = 0 configure:29359: result: yes configure:29362: checking size of double configure:29750: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) configure:29753: $? = 0 configure:29759: ./conftest configure:29762: $? = 0 configure:29784: result: 8 configure:29791: checking for long double configure:29821: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 conftest.c:111: warning: use of `long double' type; its size may change in a future release conftest.c:111: warning: (Long double usage is reported only once for each file. conftest.c:111: warning: To disable this warning, use -Wno-long-double.) configure:29827: $? = 0 configure:29834: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:29837: $? = 0 configure:29844: test -s conftest.o configure:29847: $? = 0 configure:29859: result: yes configure:29862: checking size of long double configure:30250: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 conftest.c:111: warning: use of `long double' type; its size may change in a future release conftest.c:111: warning: (Long double usage is reported only once for each file. conftest.c:111: warning: To disable this warning, use -Wno-long-double.) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) configure:30253: $? = 0 configure:30259: ./conftest configure:30262: $? = 0 configure:30284: result: 12 configure:30291: checking for size_t configure:30359: result: yes configure:30362: checking size of size_t configure:30750: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) configure:30753: $? = 0 configure:30759: ./conftest configure:30762: $? = 0 configure:30784: result: 4 configure:30793: checking whether we can compute C Make dependencies configure:30828: result: yes, using cc -std=gnu99 -MM configure:30852: checking whether cc -std=gnu99 supports -c -o FILE.lo configure:30862: cc -std=gnu99 -fno-common -c conftest.c -o TMP/conftest.lo 1>&5 configure:30865: $? = 0 configure:30868: cc -std=gnu99 -fno-common -c conftest.c -o TMP/conftest.lo 1>&5 configure:30871: $? = 0 configure:30879: result: yes configure:30919: checking how to get verbose linking output from gfortran42 configure:30935: gfortran42 -c -g conftest.f >&5 MAIN main: configure:30941: $? = 0 configure:30948: test -z "$ac_f77_werror_flag" || test ! -s conftest.err configure:30951: $? = 0 configure:30958: test -s conftest.o configure:30961: $? = 0 configure:30980: gfortran42 -o conftest -g -v -L/usr/local/lib conftest.f MAIN main: Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) /usr/libexec/gcc/darwin/i386/3.3/cc1 -quiet -v -D__GNUC__=3 -D__GNUC_MINOR__=3 -D__GNUC_PATCHLEVEL__=0 -D__APPLE_CC__=1809 -D__DYNAMIC__ /tmp/conftest.c -fPIC -quiet -dumpbase conftest.c -auxbase-strip conftest -g -version -o /var/tmp//ccZxAfPh.s GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809) (i386-darwin) compiled by GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809). GGC heuristics: --param ggc-min-expand=30 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/i386-darwin/include" ignoring nonexistent directory "/Local/Library/Frameworks" #include "..." search starts here: #include <...> search starts here: /usr/local/include /usr/include/gcc/darwin/3.3 /usr/include End of search list. Framework search starts here: /System/Library/Frameworks /Library/Frameworks End of framework search list. /usr/libexec/gcc/darwin/i386/as -arch i386 -force_cpusubtype_ALL -o conftest /var/tmp//ccZxAfPh.s configure:30980: gfortran42 -o conftest -g -verbose -L/usr/local/lib conftest.f MAIN main: cc: unrecognized option `-verbose' configure:30980: gfortran42 -o conftest -g --verbose -L/usr/local/lib conftest.f MAIN main: Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) /usr/libexec/gcc/darwin/i386/3.3/cc1 -quiet -v -D__GNUC__=3 -D__GNUC_MINOR__=3 -D__GNUC_PATCHLEVEL__=0 -D__APPLE_CC__=1809 -D__DYNAMIC__ /tmp/conftest.c -fPIC -quiet -dumpbase conftest.c -auxbase-strip conftest -g -version -o /var/tmp//ccc1RLUi.s GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809) (i386-darwin) compiled by GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809). GGC heuristics: --param ggc-min-expand=30 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/i386-darwin/include" ignoring nonexistent directory "/Local/Library/Frameworks" #include "..." search starts here: #include <...> search starts here: /usr/local/include /usr/include/gcc/darwin/3.3 /usr/include End of search list. Framework search starts here: /System/Library/Frameworks /Library/Frameworks End of framework search list. /usr/libexec/gcc/darwin/i386/as -arch i386 -force_cpusubtype_ALL -o conftest /var/tmp//ccc1RLUi.s configure:30980: gfortran42 -o conftest -g -V -L/usr/local/lib conftest.f MAIN main: cc: `-V' must come at the start of the command line configure:30980: gfortran42 -o conftest -g -### -L/usr/local/lib conftest.f MAIN main: Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) "/usr/libexec/gcc/darwin/i386/3.3/cc1" "-quiet" "-D__GNUC__=3" "-D__GNUC_MINOR__=3" "-D__GNUC_PATCHLEVEL__=0" "-D__APPLE_CC__=1809" "-D__DYNAMIC__" "/tmp/conftest.c" "-fPIC" "-quiet" "-dumpbase" "conftest.c" "-auxbase-strip" "conftest" "-g" "-o" "/var/tmp//ccBxG8mI.s" "/usr/libexec/gcc/darwin/i386/as" "-arch" "i386" "-force_cpusubtype_ALL" "-o" "conftest" "/var/tmp//ccBxG8mI.s" configure:31032: WARNING: cannot determine how to obtain linking information from gfortran42 configure:31046: result: configure:31048: checking for Fortran 77 libraries of gfortran42 configure:31071: gfortran42 -o conftest -g -L/usr/local/lib conftest.f MAIN main: configure:31245: result: configure:31263: checking how to get verbose linking output from cc -std=gnu99 configure:31289: cc -std=gnu99 -c -fno-common -I/usr/local/include conftest.c >&5 configure:31295: $? = 0 configure:31302: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:31305: $? = 0 configure:31312: test -s conftest.o configure:31315: $? = 0 configure:31348: cc -std=gnu99 -o conftest -fno-common -v -I/usr/local/include -L/usr/local/lib conftest.c >&5 Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) /usr/libexec/gcc/darwin/i386/3.3/cc1 -quiet -v -I/usr/local/include -D__GNUC__=3 -D__GNUC_MINOR__=3 -D__GNUC_PATCHLEVEL__=0 -D__APPLE_CC__=1809 -D__DYNAMIC__ conftest.c -fPIC -quiet -dumpbase conftest.c -auxbase conftest -std=gnu99 -version -fno-common -o /var/tmp//ccVqsSQU.s GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809) (i386-darwin) compiled by GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809). GGC heuristics: --param ggc-min-expand=30 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/i386-darwin/include" ignoring nonexistent directory "/Local/Library/Frameworks" ignoring duplicate directory "/usr/local/include" as it is a non-system directory that duplicates a system directory #include "..." search starts here: #include <...> search starts here: /usr/local/include /usr/include/gcc/darwin/3.3 /usr/include End of search list. Framework search starts here: /System/Library/Frameworks /Library/Frameworks End of framework search list. /usr/libexec/gcc/darwin/i386/as -arch i386 -force_cpusubtype_ALL -o /var/tmp//ccGbQZmE.o /var/tmp//ccVqsSQU.s ld -arch i386 -dynamic -o conftest -lcrt1.o -lcrt2.o -L/usr/local/lib -L/usr/lib/gcc/darwin/3.3 -L/usr/lib/gcc/darwin -L/usr/libexec/gcc/darwin/i386/3.3/../../.. /var/tmp//ccGbQZmE.o -lgcc -lSystem | c++filt configure:31392: result: -v configure:31394: checking for C libraries of cc -std=gnu99 configure:31431: cc -std=gnu99 -o conftest -fno-common -v -I/usr/local/include -L/usr/local/lib conftest.c >&5 Reading specs from /usr/libexec/gcc/darwin/i386/3.3/specs Thread model: posix gcc version 3.3 20030304 (Apple Computer, Inc. build 1809) /usr/libexec/gcc/darwin/i386/3.3/cc1 -quiet -v -I/usr/local/include -D__GNUC__=3 -D__GNUC_MINOR__=3 -D__GNUC_PATCHLEVEL__=0 -D__APPLE_CC__=1809 -D__DYNAMIC__ conftest.c -fPIC -quiet -dumpbase conftest.c -auxbase conftest -std=gnu99 -version -fno-common -o /var/tmp//ccDbFUmi.s GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809) (i386-darwin) compiled by GNU C version 3.3 20030304 (Apple Computer, Inc. build 1809). GGC heuristics: --param ggc-min-expand=30 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/i386-darwin/include" ignoring nonexistent directory "/Local/Library/Frameworks" ignoring duplicate directory "/usr/local/include" as it is a non-system directory that duplicates a system directory #include "..." search starts here: #include <...> search starts here: /usr/local/include /usr/include/gcc/darwin/3.3 /usr/include End of search list. Framework search starts here: /System/Library/Frameworks /Library/Frameworks End of framework search list. /usr/libexec/gcc/darwin/i386/as -arch i386 -force_cpusubtype_ALL -o /var/tmp//cc8HZjxp.o /var/tmp//ccDbFUmi.s ld -arch i386 -dynamic -o conftest -lcrt1.o -lcrt2.o -L/usr/local/lib -L/usr/lib/gcc/darwin/3.3 -L/usr/lib/gcc/darwin -L/usr/libexec/gcc/darwin/i386/3.3/../../.. /var/tmp//cc8HZjxp.o -lgcc -lSystem | c++filt configure:31580: result: -lcrt2.o -L/usr/local/lib -L/usr/lib/gcc/darwin/3.3 -L/usr/lib/gcc/darwin -L/usr/libexec/gcc/darwin/i386/3.3/../../.. -lSystem configure:31711: checking for dummy main to link with Fortran 77 libraries configure:31755: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used configure:31761: $? = 0 configure:31768: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:31771: $? = 0 configure:31778: test -s conftest configure:31781: $? = 0 configure:31874: result: none configure:31911: checking for Fortran 77 name-mangling scheme configure:31930: gfortran42 -c -g conftest.f >&5 foobar: foo_bar: configure:31936: $? = 0 configure:31943: test -z "$ac_f77_werror_flag" || test ! -s conftest.err configure:31946: $? = 0 configure:31953: test -s conftest.o configure:31956: $? = 0 configure:32008: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used ld: Undefined symbols: _foobar configure:32014: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_PWD_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define RETSIGTYPE void | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_SIZE_T 4 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:32008: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used configure:32014: $? = 0 configure:32021: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:32024: $? = 0 configure:32031: test -s conftest configure:32034: $? = 0 configure:32109: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used ld: Undefined symbols: _foo_bar_ configure:32115: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" | #define PACKAGE_VERSION "2.6.0" | #define PACKAGE_STRING "R 2.6.0" | #define PACKAGE_BUGREPORT "r-bugs@R-project.org" | #define PACKAGE "R" | #define VERSION "2.6.0" | #define R_PLATFORM "i386-unknown-gnu" | #define R_CPU "i386" | #define R_VENDOR "unknown" | #define R_OS "gnu" | #define Unix 1 | #define R_ARCH "" | #define _GNU_SOURCE 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_LIBM 1 | #define HAVE_LIBDL 1 | #define HAVE_READLINE_HISTORY_H 1 | #define HAVE_READLINE_READLINE_H 1 | #define HAVE_LIBREADLINE 1 | #define STDC_HEADERS 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_DIRENT_H 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_DLFCN_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_GLOB_H 1 | #define HAVE_GRP_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_LOCALE_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_PWD_H 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_TIMES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | #define RETSIGTYPE void | #define R_SOCKLEN_T socklen_t | #define HAVE_STACK_T 1 | #define HAVE_INTPTR_T 1 | #define HAVE_UINTPTR_T 1 | #define R_INLINE inline | #define SIZEOF_INT 4 | #define INT_32_BITS 1 | #define SIZEOF_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_SIZE_T 4 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foo_bar_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main () | { | return foo_bar_ (); | ; | return 0; | } configure:32109: cc -std=gnu99 -o conftest -fno-common -I/usr/local/include -L/usr/local/lib conftest.c cfortran_test.o -ldl -lm >&5 symbol _dladdr used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlclose used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlerror used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlopen used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) symbol _dlsym used from dynamic library /usr/lib/libm.dylib(dyldAPIsInLibSystem.o) not from earlier dynamic library /usr/local/lib/libdl.1.dylib(dlfcn.o) ld: warning suggest use of -bind_at_load, as lazy binding may result in errors or different symbols being used configure:32115: $? = 0 configure:32122: test -z "$ac_c_werror_flag" || test ! -s conftest.err configure:32125: $? = 0 configure:32132: test -s conftest configure:32135: $? = 0 configure:32188: result: lower case, underscore, extra underscore configure:32301: checking whether gfortran42 appends underscores to external names configure:32317: result: yes configure:32333: checking whether gfortran42 appends extra underscores to external names configure:32349: result: yes configure:32367: checking whether mixed C/Fortran code can be run cftest: ld: Undefined symbols: _pow_di configure:32431: WARNING: cannot run mixed C/Fortran code configure:32433: error: Maybe check LDFLAGS for paths to Fortran libraries? ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=i386-unknown-gnu ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_cxx_compiler_gnu=yes ac_cv_env_BLAS_LIBS_set= ac_cv_env_BLAS_LIBS_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=cc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value=-fno-common ac_cv_env_CPICFLAGS_set= ac_cv_env_CPICFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value=-fno-common ac_cv_env_CXXPICFLAGS_set= ac_cv_env_CXXPICFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=c++ ac_cv_env_DEFS_set= ac_cv_env_DEFS_value= ac_cv_env_DYLIB_LDFLAGS_set= ac_cv_env_DYLIB_LDFLAGS_value= ac_cv_env_DYLIB_LD_set= ac_cv_env_DYLIB_LD_value= ac_cv_env_F77_set=set ac_cv_env_F77_value=gfortran42 ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FCPICFLAGS_set= ac_cv_env_FCPICFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=gfortran42 ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_FPICFLAGS_set= ac_cv_env_FPICFLAGS_value= ac_cv_env_JAVA_HOME_set= ac_cv_env_JAVA_HOME_value= ac_cv_env_LAPACK_LIBS_set= ac_cv_env_LAPACK_LIBS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBnn_set= ac_cv_env_LIBnn_value= ac_cv_env_MAIN_CFLAGS_set= ac_cv_env_MAIN_CFLAGS_value= ac_cv_env_MAIN_FFLAGS_set= ac_cv_env_MAIN_FFLAGS_value= ac_cv_env_MAIN_LDFLAGS_set= ac_cv_env_MAIN_LDFLAGS_value= ac_cv_env_MAIN_LD_set= ac_cv_env_MAIN_LD_value= ac_cv_env_MAKE_set= ac_cv_env_MAKE_value= ac_cv_env_OBJCFLAGS_set= ac_cv_env_OBJCFLAGS_value= ac_cv_env_OBJC_set= ac_cv_env_OBJC_value= ac_cv_env_R_BATCHSAVE_set= ac_cv_env_R_BATCHSAVE_value= ac_cv_env_R_BROWSER_set= ac_cv_env_R_BROWSER_value= ac_cv_env_R_PAPERSIZE_set= ac_cv_env_R_PAPERSIZE_value= ac_cv_env_R_PRINTCMD_set= ac_cv_env_R_PRINTCMD_value= ac_cv_env_SAFE_FFLAGS_set= ac_cv_env_SAFE_FFLAGS_value= ac_cv_env_SHLIB_CFLAGS_set= ac_cv_env_SHLIB_CFLAGS_value= ac_cv_env_SHLIB_CXXLDFLAGS_set= ac_cv_env_SHLIB_CXXLDFLAGS_value= ac_cv_env_SHLIB_CXXLD_set= ac_cv_env_SHLIB_CXXLD_value= ac_cv_env_SHLIB_FCD_set= ac_cv_env_SHLIB_FCD_value= ac_cv_env_SHLIB_FCLDFLAGS_set= ac_cv_env_SHLIB_FCLDFLAGS_value= ac_cv_env_SHLIB_FFLAGS_set= ac_cv_env_SHLIB_FFLAGS_value= ac_cv_env_SHLIB_LDFLAGS_set= ac_cv_env_SHLIB_LDFLAGS_value= ac_cv_env_SHLIB_LD_set= ac_cv_env_SHLIB_LD_value= ac_cv_env_TCLTK_CPPFLAGS_set= ac_cv_env_TCLTK_CPPFLAGS_value= ac_cv_env_TCLTK_LIBS_set= ac_cv_env_TCLTK_LIBS_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=i386-unknown-gnu ac_cv_env_host_alias_set=set ac_cv_env_host_alias_value=i386-unknown-gnu ac_cv_env_r_arch_set= ac_cv_env_r_arch_value= ac_cv_env_target_alias_set=set ac_cv_env_target_alias_value=i386-unknown-gnu ac_cv_f77_compiler_gnu=no ac_cv_f77_dummy_main=none ac_cv_f77_libs= ac_cv_f77_mangling='lower case, underscore, extra underscore' ac_cv_fortran_dummy_main=none ac_cv_func_history_truncate_file=no ac_cv_have_decl_rl_completion_matches=no ac_cv_have_decl_siglongjmp=yes ac_cv_have_decl_sigsetjmp=yes ac_cv_header_arpa_inet_h=yes ac_cv_header_dirent_dirent_h=yes ac_cv_header_dl_h=no ac_cv_header_dlfcn_h=yes ac_cv_header_elf_h=no ac_cv_header_errno_h=yes ac_cv_header_fcntl_h=yes ac_cv_header_floatingpoint_h=no ac_cv_header_fpu_control_h=no ac_cv_header_glob_h=yes ac_cv_header_grp_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_limits_h=yes ac_cv_header_locale_h=yes ac_cv_header_memory_h=yes ac_cv_header_netdb_h=yes ac_cv_header_netinet_in_h=yes ac_cv_header_pwd_h=yes ac_cv_header_readline_history_h=yes ac_cv_header_readline_readline_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_param_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_select_h=yes ac_cv_header_sys_socket_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_times_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_utsname_h=yes ac_cv_header_sys_wait_h=yes ac_cv_header_time=yes ac_cv_header_time_h=yes ac_cv_header_unistd_h=yes ac_cv_host=i386-unknown-gnu ac_cv_lib_dl_dlopen=yes ac_cv_lib_m_cos=yes ac_cv_lib_m_sin=yes ac_cv_lib_readline_rl_callback_read_char=yes ac_cv_objc_compiler_gnu=yes ac_cv_objext=o ac_cv_path_DVIPS=/usr/local/bin/dvips ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_GETWD=/bin/pwd ac_cv_path_GREP=/usr/bin/grep ac_cv_path_LATEX=/usr/local/bin/latex ac_cv_path_MAKEINDEX=/usr/local/bin/makeindex ac_cv_path_MAKEINFO=/usr/local/bin/makeinfo ac_cv_path_PAGER=/usr/bin/less ac_cv_path_PDFLATEX=/usr/local/bin/pdflatex ac_cv_path_PDFTEX=/usr/local/bin/pdftex ac_cv_path_PERL=/usr/bin/perl ac_cv_path_R_BROWSER=/usr/local/bin/mozilla ac_cv_path_R_GZIPCMD=/usr/bin/gzip ac_cv_path_R_PDFVIEWER=/usr/local/bin/acroread ac_cv_path_R_UNZIPCMD=/usr/bin/unzip ac_cv_path_R_ZIPCMD=/usr/bin/zip ac_cv_path_SED=/usr/bin/sed ac_cv_path_TEX=/usr/local/bin/tex ac_cv_path_TEXI2DVI=/usr/bin/texi2dvi ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CC=cc ac_cv_prog_CPP='cc -E' ac_cv_prog_CXXCPP='c++ -E' ac_cv_prog_F77=gfortran42 ac_cv_prog_RANLIB=ranlib ac_cv_prog_YACC='bison -y' ac_cv_prog_ac_ct_OBJC=gcc ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_c99=-std=gnu99 ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc=-std=gnu99 ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_f77_v= ac_cv_prog_gcc_traditional=no ac_cv_prog_objc_g=yes ac_cv_search_opendir='none required' ac_cv_sizeof_double=8 ac_cv_sizeof_int=4 ac_cv_sizeof_long=4 ac_cv_sizeof_long_double=12 ac_cv_sizeof_long_long=8 ac_cv_sizeof_size_t=4 ac_cv_type_blkcnt_t=yes ac_cv_type_double=yes ac_cv_type_int=yes ac_cv_type_intptr_t=yes ac_cv_type_long=yes ac_cv_type_long_double=yes ac_cv_type_long_long=yes ac_cv_type_pid_t=yes ac_cv_type_signal=void ac_cv_type_size_t=yes ac_cv_type_stack_t=yes ac_cv_type_uintptr_t=yes lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX=/usr/bin/ld lt_cv_path_NM=nm lt_cv_path_SED=/usr/local/bin/sed lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=no lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_gnu_ld=no lt_cv_prog_gnu_ldcxx=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\(_\)\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2\3 \3/p'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \([^ ]*\) \([^ ]*\)$/ {"\2", (lt_ptr) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^. .* \(.*\)$/extern int \1;/p'\''' lt_cv_sys_max_cmd_len= lt_lt_cv_prog_compiler_c_o='"yes"' lt_lt_cv_prog_compiler_c_o_CXX='"yes"' lt_lt_cv_prog_compiler_c_o_F77='"no"' lt_lt_cv_sys_global_symbol_pipe='"sed -n -e '\''s/^.*[ ]\\([BCDEGRST][BCDEGRST]*\\)[ ][ ]*\\(_\\)\\([_A-Za-z][_A-Za-z0-9]*\\)\$/\\1 \\2\\3 \\3/p'\''"' lt_lt_cv_sys_global_symbol_to_c_name_address='"sed -n -e '\''s/^: \\([^ ]*\\) \$/ {\\\"\\1\\\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \\([^ ]*\\) \\([^ ]*\\)\$/ {\"\\2\", (lt_ptr) \\&\\2},/p'\''"' lt_lt_cv_sys_global_symbol_to_cdecl='"sed -n -e '\''s/^. .* \\(.*\\)\$/extern int \\1;/p'\''"' r_cv_c_inline=inline r_cv_c_libs=' -lcrt2.o -L/usr/local/lib -L/usr/lib/gcc/darwin/3.3 -L/usr/lib/gcc/darwin -L/usr/libexec/gcc/darwin/i386/3.3/../../.. -lSystem' r_cv_header_glibc2=no r_cv_header_setjmp_posix=yes r_cv_prog_c_v=-v r_cv_prog_cc_c_o_lo=yes r_cv_prog_cc_m='cc -std=gnu99 -MM' r_cv_prog_cc_vis=no r_cv_prog_f77_append_second_underscore=yes r_cv_prog_f77_append_underscore=yes r_cv_prog_f77_vis=no r_cv_prog_makeinfo_v4=yes r_cv_prog_perl_v5=yes r_cv_size_max=no r_cv_type_socklen=socklen_t r_cv_visibility_attribute=no ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='aclocal' ALLOCA='' AR='ar' ARFLAGS='rc' AUTOCONF='autoconf' AUTOHEADER='autoheader' AUTOMAKE='automake' AWK='gawk' BITMAP_LIBS='' BLAS_LIBS0='' BLAS_LIBS='' BLAS_SHLIB_FALSE='' BLAS_SHLIB_TRUE='' BUILDDIR_IS_SRCDIR='yes' BUILD_AQUA_FALSE='' BUILD_AQUA_TRUE='' BUILD_BZLIB_FALSE='' BUILD_BZLIB_TRUE='' BUILD_CC='' BUILD_CYGWIN_FALSE='' BUILD_CYGWIN_TRUE='' BUILD_INCLUDED_LIBINTL='' BUILD_LIBINTL_FALSE='' BUILD_LIBINTL_TRUE='' BUILD_PCRE_FALSE='' BUILD_PCRE_TRUE='' BUILD_R='' BUILD_XDR_FALSE='' BUILD_XDR_TRUE='' BUILD_ZLIB_FALSE='' BUILD_ZLIB_TRUE='' CATOBJEXT='' CC='cc -std=gnu99' CFLAGS='-fno-common' CFLAG_VISIBILITY='' COMPILE_FORTRAN_DOUBLE_COMPLEX_FALSE='' COMPILE_FORTRAN_DOUBLE_COMPLEX_TRUE='' CPICFLAGS='' CPP='cc -E' CPPFLAGS='-I/usr/local/include' CROSS_COMPILING_FALSE='' CROSS_COMPILING_TRUE='#' CXX='c++' CXXCPP='c++ -E' CXXFLAGS='-fno-common' CXXPICFLAGS='' C_VISIBILITY='' DATADIRNAME='' DEFS='' DVIPS='/usr/local/bin/dvips' DYLIB_EXT='' DYLIB_LD='' DYLIB_LDFLAGS='' DYLIB_UNDEFINED_ALLOWED_FALSE='' DYLIB_UNDEFINED_ALLOWED_TRUE='' ECHO='echo' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EXEEXT='' F77='gfortran42' F77_VISIBILITY='' FALSE='' FC='gfortran42' FCFLAGS='' FCFLAGS_f90='' FCFLAGS_f95='' FCPICFLAGS='' FFLAGS='-g' FLIBS='' FOUNDATION_CPPFLAGS='' FOUNDATION_LIBS='' FPICFLAGS='' FW_VERSION='' GENCAT='' GETWD='/bin/pwd' GLIBC21='' GLIBC2='' GMSGFMT='' GMSGFMT_015='' GREP='/usr/bin/grep' HAVE_ASPRINTF='' HAVE_C99_COMPLEX='' HAVE_FORTRAN_DOUBLE_COMPLEX='' HAVE_POSIX_PRINTF='' HAVE_SNPRINTF='' HAVE_VISIBILITY='' HAVE_WPRINTF='' INSTALL_DATA='install -o root -g wheel -m 644' INSTALL_INFO='$(PERL) $(top_srcdir)/tools/install-info.pl' INSTALL_PROGRAM='install -s -o root -g wheel -m 555' INSTALL_SCRIPT='install -o root -g wheel -m 555' INSTOBJEXT='' INTLBISON='' INTLLIBS='' INTLOBJS='' INTL_LIBTOOL_SUFFIX_PREFIX='' INTL_MACOSX_LIBS='' JAR='' JAVA='' JAVAC='' JAVAH='' JAVA_CPPFLAGS0='' JAVA_HOME='' JAVA_LD_LIBRARY_PATH='' JAVA_LIBS0='' LAPACK_LDFLAGS='' LAPACK_LIBS='' LATEX='/usr/local/bin/latex' LDFLAGS='-L/usr/local/lib' LIBICONV='' LIBINTL='' LIBM='-lm' LIBMULTITHREAD='' LIBOBJS='' LIBPTH='' LIBR='-L$(R_HOME)/lib$(R_ARCH) -lR' LIBR_LDFLAGS='' LIBS='-ldl -lm ' LIBTHREAD='' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIBTOOL_DEPS='tools/ltmain.sh' LIBnn='lib' LN_S='ln -s' LTLIBICONV='' LTLIBINTL='' LTLIBMULTITHREAD='' LTLIBOBJS='' LTLIBPTH='' LTLIBTHREAD='' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAIN_CFLAGS='' MAIN_FFLAGS='' MAIN_LD='' MAIN_LDFLAGS='' MAJ_MIN_VERSION='2.6' MAKE='make' MAKEINDEX='/usr/local/bin/makeindex' MAKEINFO='/usr/local/bin/makeinfo' MSGFMT='' MSGFMT_015='' MSGMERGE='' NO_PERL5='false' OBJC='' OBJCFLAGS='-g -O2' OBJCXX='c++' OBJCXXFLAGS='' OBJC_LIBS='' OBJEXT='o' OSF_SH_BUG='' PACKAGE='R' PACKAGE_BUGREPORT='r-bugs@R-project.org' PACKAGE_NAME='R' PACKAGE_STRING='R 2.6.0' PACKAGE_TARNAME='R' PACKAGE_VERSION='2.6.0' PAGER='/usr/bin/less' PAPERCONF='' PATH_SEPARATOR=':' PDFLATEX='/usr/local/bin/pdflatex' PDFTEX='/usr/local/bin/pdftex' PERL='/usr/bin/perl' POSUB='' PRI_MACROS_BROKEN='' RANLIB='ranlib' RBLAS_LDFLAGS='' READLINE_LIBS='-lreadline ' RLAPACK_LDFLAGS='' RMATH_HAVE_EXPM1='' RMATH_HAVE_LOG1P='' RMATH_HAVE_WORKING_LOG1P='' R_ARCH='' R_BATCHSAVE='' R_BROWSER='/usr/local/bin/mozilla' R_DEFS='' R_GZIPCMD='/usr/bin/gzip' R_JAVA_LD_LIBRARY_PATH='' R_LD_LIBRARY_PATH='/usr/local/lib' R_MODULES='' R_OSTYPE='unix' R_PAPERSIZE='' R_PDFVIEWER='/usr/local/bin/acroread' R_PLATFORM='i386-unknown-gnu' R_PRINTCMD='' R_PROFILING='' R_RD4DVI='ae' R_RD4PDF='times,hyper' R_UNZIPCMD='/usr/bin/unzip' R_XTRA_CFLAGS='' R_XTRA_CPPFLAGS='' R_XTRA_CXXFLAGS='' R_XTRA_FFLAGS='' R_XTRA_LIBS='' R_ZIPCMD='/usr/bin/zip' SAFE_FFLAGS='' SED='/usr/local/bin/sed' SET_MAKE='' SHELL='/bin/sh' SHLIB_CFLAGS='' SHLIB_CXXFLAGS='' SHLIB_CXXLD='' SHLIB_CXXLDFLAGS='' SHLIB_EXT='' SHLIB_FCD='' SHLIB_FCLD='' SHLIB_FCLDFLAGS='' SHLIB_FFLAGS='' SHLIB_LD='' SHLIB_LDFLAGS='' SHLIB_LIBADD='' STRIP='strip' SUPPORT_MBCS='' SUPPORT_UTF8='' TAR='tar' TCLTK_CPPFLAGS='' TCLTK_LIBS='' TCL_CONFIG='' TEX='/usr/local/bin/tex' TEXI2DVI='/usr/bin/texi2dvi' TK_CONFIG='' USE_EXPORTFILES_FALSE='' USE_EXPORTFILES_TRUE='' USE_EXTERNAL_BLAS_FALSE='' USE_EXTERNAL_BLAS_TRUE='' USE_EXTERNAL_LAPACK_FALSE='' USE_EXTERNAL_LAPACK_TRUE='' USE_INCLUDED_LIBINTL='' USE_LIBTOOL_FALSE='' USE_LIBTOOL_TRUE='#' USE_MMAP_ZLIB_FALSE='' USE_MMAP_ZLIB_TRUE='' USE_NLS='' USE_NLS_FALSE='' USE_NLS_TRUE='' USE_RECOMMENDED_PACKAGES_FALSE='' USE_RECOMMENDED_PACKAGES_TRUE='' USE_VECLIB_G95FIX_FALSE='' USE_VECLIB_G95FIX_TRUE='' VERSION='2.6.0' WANT_R_FRAMEWORK_FALSE='' WANT_R_FRAMEWORK_TRUE='#' WANT_R_SHLIB_FALSE='#' WANT_R_SHLIB_TRUE='' WOE32DLL='' XGETTEXT='' XGETTEXT_015='' XMKMF='' XTRA_INTL_CPPFLAGS='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' YACC='bison -y' YFLAGS='' ac_ct_CC='' ac_ct_CXX='' ac_ct_F77='' ac_ct_FC='' ac_ct_OBJC='gcc' bindir='${exec_prefix}/bin' build='i386-unknown-gnu' build_alias='i386-unknown-gnu' build_cpu='i386' build_os='gnu' build_vendor='unknown' config_opts=' '\''--enable-R-shlib'\'' '\''--with-system-bzlib'\'' '\''--with-system-zlib'\'' '\''rdocdir=/usr/local/share/doc/R'\'' '\''--with-blas=-lblas'\'' '\''--with-tcltk'\'' '\''--with-jpeglib'\'' '\''--with-libpng'\'' '\''--with-x'\'' '\''--with-system-pcre'\'' '\''--x-libraries=/usr/X11R6/lib'\'' '\''--x-includes=/usr/X11R6/include'\'' '\''--prefix=/usr/local'\'' '\''i386-unknown-gnu'\'' '\''build_alias=i386-unknown-gnu'\'' '\''host_alias=i386-unknown-gnu'\'' '\''target_alias=i386-unknown-gnu'\'' '\''CC=cc'\'' '\''CFLAGS=-fno-common'\'' '\''F77=gfortran42'\'' '\''CXX=c++'\'' '\''CXXFLAGS=-fno-common'\'' '\''FC=gfortran42'\''' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='i386-unknown-gnu' host_alias='i386-unknown-gnu' host_cpu='i386' host_os='gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' libdir='${exec_prefix}/${LIBnn}' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr/local' program_transform_name='s,x,x,' psdir='${docdir}' r_arch='' rdocdir='/usr/local/share/doc/R' rincludedir='${rhome}/include' rsharedir='${rhome}/share' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' shlibpath_var='LD_LIBRARY_PATH' striplib='' sysconfdir='${prefix}/etc' target_alias='i386-unknown-gnu' use_aqua='' use_tcltk='' ## ------------------- ## ## File substitutions. ## ## ------------------- ## r_cc_lo_rules_frag='Makefrag.cc_lo' r_cc_rules_frag='Makefrag.cc' r_cxx_rules_frag='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define PACKAGE_NAME "R" #define PACKAGE_TARNAME "R" #define PACKAGE_VERSION "2.6.0" #define PACKAGE_STRING "R 2.6.0" #define PACKAGE_BUGREPORT "r-bugs@R-project.org" #define PACKAGE "R" #define VERSION "2.6.0" #define R_PLATFORM "i386-unknown-gnu" #define R_CPU "i386" #define R_VENDOR "unknown" #define R_OS "gnu" #define Unix 1 #define R_ARCH "" #define _GNU_SOURCE 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define HAVE_LIBM 1 #define HAVE_LIBDL 1 #define HAVE_READLINE_HISTORY_H 1 #define HAVE_READLINE_READLINE_H 1 #define HAVE_LIBREADLINE 1 #define STDC_HEADERS 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_DIRENT_H 1 #define HAVE_SYS_WAIT_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_DLFCN_H 1 #define HAVE_FCNTL_H 1 #define HAVE_GLOB_H 1 #define HAVE_GRP_H 1 #define HAVE_LIMITS_H 1 #define HAVE_LOCALE_H 1 #define HAVE_NETDB_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_PWD_H 1 #define HAVE_STDBOOL_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_TIMES_H 1 #define HAVE_SYS_UTSNAME_H 1 #define HAVE_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ERRNO_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDARG_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRING_H 1 #define HAVE_DECL_SIGSETJMP 1 #define HAVE_DECL_SIGLONGJMP 1 #define HAVE_POSIX_SETJMP 1 #define RETSIGTYPE void #define R_SOCKLEN_T socklen_t #define HAVE_STACK_T 1 #define HAVE_INTPTR_T 1 #define HAVE_UINTPTR_T 1 #define R_INLINE inline #define SIZEOF_INT 4 #define INT_32_BITS 1 #define SIZEOF_LONG 4 #define SIZEOF_LONG_LONG 8 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 12 #define SIZEOF_SIZE_T 4 #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## __ #define HAVE_F77_UNDERSCORE 1 #define HAVE_F77_EXTRA_UNDERSCORE 1 configure: exit 1