% File src/library/stats/man/extractAIC.Rd % Part of the R package, http://www.R-project.org % Copyright 1995-2007 R Core Development Team % Distributed under GPL 2 or later %-- This page by Martin Maechler, improvements welcome! \name{extractAIC} \title{Extract AIC from a Fitted Model} % \alias{extractAIC} \usage{ extractAIC(fit, scale, k = 2, \dots) } \arguments{ \item{fit}{fitted model, usually the result of a fitter like \code{\link{lm}}.} \item{scale}{optional numeric specifying the scale parameter of the model, see \code{scale} in \code{\link{step}}. Currently only used in the \code{"lm"} method, where \code{scale} specifies the estimate of the error variance, and \code{scale = 0} indicates that it is to be estimated by maximum likelihood. } \item{k}{numeric specifying the \sQuote{weight} of the \emph{equivalent degrees of freedom} (\eqn{\equiv}{=:} \code{edf}) part in the AIC formula.} \item{\dots}{further arguments (currently unused in base \R).} } %-- Source in ../R/add.R \description{ Computes the (generalized) Akaike \bold{A}n \bold{I}nformation \bold{C}riterion for a fitted parametric model. } \details{ This is a generic function, with methods in base \R for \code{"aov"}, \code{"coxph"}, \code{"glm"}, \code{"lm"}, \code{"negbin"} and \code{"survreg"} classes. The criterion used is \deqn{AIC = - 2\log L + k \times \mbox{edf},}{AIC = - 2*log L + k * edf,} where \eqn{L} is the likelihood and \code{edf} the equivalent degrees of freedom (i.e., the number of free parameters for usual parametric models) of \code{fit}. For linear models with unknown scale (i.e., for \code{\link{lm}} and \code{\link{aov}}), \eqn{-2\log L} is computed from the \emph{deviance} and uses a different additive constant to \code{\link{logLik}} and hence \code{\link{AIC}}. If \eqn{RSS} denotes the (weighted) residual sum of squares then \code{extractAIC} uses for \eqn{- 2\log L} the formulae \eqn{RSS/s - n} (corresponding to Mallows' \eqn{C_p}{Cp}) in the case of known scale \eqn{s} and \eqn{n \log (RSS/n)} for unknown scale. \code{\link{AIC}} only handles unknown scale and uses the formula \eqn{n \log (RSS/n) - n + n \log 2\pi - \sum \log w} where \eqn{w} are the weights. For \code{glm} fits the family's \code{aic()} function to compute the AIC: see the note under \code{logLik} about the assumptions this makes. \code{k = 2} corresponds to the traditional AIC, using \code{k = log(n)} provides the BIC (Bayesian IC) instead. } \note{ This function is used in \code{\link{add1}}, \code{\link{drop1}} and \code{\link{step}} and similar functions in package \pkg{MASS} from which it was adopted. } \value{ A numeric vector of length 2, giving \item{edf}{the \sQuote{\bold{e}quivalent \bold{d}egrees of \bold{f}reedom} for the fitted model \code{fit}.} \item{AIC}{the (generalized) Akaike Information Criterion for \code{fit}.} } %-- Source in ../R/add.R \author{B. D. Ripley} \references{ Venables, W. N. and Ripley, B. D. (2002) \emph{Modern Applied Statistics with S.} New York: Springer (4th ed). } \seealso{ \code{\link{AIC}}, \code{\link{deviance}}, \code{\link{add1}}, \code{\link{step}} } \examples{ utils::example(glm) extractAIC(glm.D93)#>> 5 15.129 } \keyword{models}