#!/bin/sh
if test -z "${R_HOME}"; then
echo "This command can be executed via R CMD only!"
exit 1
fi
SED=sed
tools_classpath=${R_SHARE_DIR}/java
usage="
Usage: R CMD javareconf [options]
Detect current Java setup and update the corresponding configuration in R.
Options:
-h, --help print short help message and exit
-n, --dry-run perform Java detection, but don't touch any
configurations files
xxx=yyy evaluate the corresponding expression
(e.g. JAVA_HOME=/usr/lib/java)
Environment variables that can be used to influence the detection:
JAVA path to a Java interpreter executable
By default first 'java' command found on the PATH
is taken (unless JAVA_HOME is also specified).
JAVA_HOME home of the Java environment. If not specified,
it will be detected automatically from the Java
interpreter.
Report bugs to <r-bugs@r-project.org>."
dry_run=no
while test -n "${1}"; do
case ${1} in
-help | --help | -h) echo "${usage}"; exit 0 ;;
-n | --dry-run) dry_run=yes ;;
*=*) eval ${1} ;;
esac
shift
done
## find java compiler binaries
if test -z "${JAVA_HOME}" ; then
JAVA_PATH=${PATH}
else
if test ! -e "${JAVA_HOME}"; then
echo "*** JAVA_HOME is not a valid path, ignoring"
JAVA_HOME=
fi
## try jre/bin first just in case we don't have full JDK
JAVA_PATH=${JAVA_HOME}:${JAVA_HOME}/jre/bin:${JAVA_HOME}/bin:${PATH}
fi
## if 'java' is not on the PATH or JAVA_HOME, add some guesses as of
## where java could live
JAVA_PATH=${JAVA_PATH}:/usr/java/bin:/usr/jdk/bin:/usr/lib/java/bin:/usr/lib/jdk/bin:/usr/local/java/bin:/usr/local/jdk\
/bin:/usr/local/lib/java/bin:/usr/local/lib/jdk/bin
if test -z "$JAVA"; then
save_IFS=$IFS; IFS=:
for dir in ${JAVA_PATH}; do
if test -f "$dir/java"; then
JAVA="$dir/java"
break
fi
done
IFS=${save_IFS}
fi
if test -z "$JAVA"; then
echo "~*** Cannot find any Java interpreter~*** Please make sure 'java' is on you PATH or set JAVA_HOME correspondingly"|${SED} -e 'y/~/\n/' >&2
exit 1
fi
echo "Java interpreter : $JAVA"
jires=`$JAVA -classpath ${tools_classpath} getsp -test`
if test "$jires" != "Test1234OK"; then
echo "$jires"
echo "~*** Java interpreter doesn't work properly.~"|${SED} -e 'y/~/\n/' >&2
exit 1
fi
if test -z "${JAVA_HOME}"; then
JAVA_HOME=`$JAVA -classpath ${tools_classpath} getsp java.home`
fi
if test -z "${JAVA_HOME}"; then
echo "~*** Cannot find Java environemnt.~*** Please set JAVA_HOME correspondingly.~"|${SED} -e 'y/~/\n/' >&2
exit 1
fi
echo "Java version : `$JAVA -classpath ${tools_classpath} getsp java.version 2>/dev/null`"
echo "Java home path : ${JAVA_HOME}"
hostos=`uname 2>/dev/null`
case "$hostos" in
Darwin*)
JAVA_LD_LIBRARY_PATH=
JAVA_LIBS="-framework JavaVM"
;;
*)
## we need to reset LD_LIBRARY_PATH, because Java automatically
## adds all LD_LIBRARY_PATH to Java path
save_LDLP=${LD_LIBRARY_PATH}
LD_LIBRARY_PATH=
export LD_LIBRARY_PATH
# remove trailing : (if any) and replace occurrences of JAVA_HOME
# with $(JAVA_HOME)
JAVA_LD_LIBRARY_PATH=`$JAVA -classpath ${tools_classpath} getsp java.library.path| ${SED} -e s:${JAVA_HOME}:\$\(JAVA_HOME\):g -e 's/:$//'`
LD_LIBRARY_PATH=${save_LDLP}
export LD_LIBRARY_PATH
# build JAVA_LIBS from the detected path
JAVA_LIBS=`echo ${JAVA_LD_LIBRARY_PATH}|${SED} -e 's|:| -L|g'`
if test -n "${JAVA_LIBS}"; then JAVA_LIBS="-L${JAVA_LIBS}"; fi
JAVA_LIBS="${JAVA_LIBS} -ljvm"
# create shell-version to be used in scripts
JAVA_LD_LIBRARY_PATH_SH=`echo ${JAVA_LD_LIBRARY_PATH}|${SED} -e 's:$(JAVA_HOME):\$\{JAVA_HOME\}:g'`
;;
esac
echo "Java library path: ${JAVA_LD_LIBRARY_PATH}"
echo "JNI linker flags : ${JAVA_LIBS}"
echo ""
if test "${dry_run}" = yes; then exit 0; fi
echo "Updating Java configuration in ${R_HOME}"
files="${R_HOME}/etc${R_ARCH}/Makeconf ${R_HOME}/etc${R_ARCH}/ldpaths"
for file in $files; do
${SED} -e "s|JAVA =.\{0,\}|JAVA = $JAVA|" -e "s|JAVA_HOME =.\{0,\}|JAVA_HOME = ${JAVA_HOME}|" -e "s|: \${JAVA_HOME=.\{1,\}|: \${JAVA_HOME=${JAVA_HOME}}|" -e "s|: \${R_JAVA_LD_LIBRARY_PATH=.\{1,\}|: \${R_JAVA_LD_LIBRARY_PATH=${JAVA_LD_LIBRARY_PATH_SH}}|" -e "s|JAVA_LIBS =.\{0,\}|JAVA_LIBS = ${JAVA_LIBS}|g" -e "s|JAVA_LD_LIBRARY_PATH =.\{0,\}|JAVA_LD_LIBRARY_PATH = ${JAVA_LD_LIBRARY_PATH}|" "$file" > "${file}.new"
if test -f "${file}.new"; then
mv "${file}" "${file}.old"
mv "${file}.new" "${file}"
else
echo "*** cannot create ${file}.new~*** Please run as root if required.~" | ${SED} -e 'y/~/\n/' >&2
exit 1
fi
done
echo "Done."
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