/* ========================================================================== */ /* === CHOLMOD/MATLAB/bisect mexFunction ==================================== */ /* ========================================================================== */ /* ----------------------------------------------------------------------------- * CHOLMOD/MATLAB Module. Copyright (C) 2005-2006, Timothy A. Davis * The CHOLMOD/MATLAB Module is licensed under Version 2.0 of the GNU * General Public License. See gpl.txt for a text of the license. * CHOLMOD is also available under other licenses; contact authors for details. * http://www.cise.ufl.edu/research/sparse * MATLAB(tm) is a Trademark of The MathWorks, Inc. * METIS (Copyright 1998, G. Karypis) is not distributed with CHOLMOD. * -------------------------------------------------------------------------- */ /* Find an node separator of an undirected graph, using * METIS_NodeComputeSeparator. * * Usage: * * s = bisect (A) bisects A, uses tril(A) * s = bisect (A, 'sym') bisects A, uses tril(A) * s = bisect (A, 'row') bisects A*A' * s = bisect (A, 'col') bisects A'*A * * Node i of the graph is in the left graph if s(i)=0, the right graph if * s(i)=1, and in the separator if s(i)=2. * * Requirse METIS and the CHOLMOD Partition Module. */ #include "cholmod_matlab.h" void mexFunction ( int nargout, mxArray *pargout [ ], int nargin, const mxArray *pargin [ ] ) { #ifndef NPARTITION double dummy = 0 ; int *Partition ; cholmod_sparse *A, Amatrix, *C, *S ; cholmod_common Common, *cm ; int n, transpose, c ; char buf [LEN] ; /* ---------------------------------------------------------------------- */ /* start CHOLMOD and set defaults */ /* ---------------------------------------------------------------------- */ cm = &Common ; cholmod_start (cm) ; sputil_config (SPUMONI, cm) ; /* ---------------------------------------------------------------------- */ /* get inputs */ /* ---------------------------------------------------------------------- */ if (nargout > 1 || nargin < 1 || nargin > 2) { mexErrMsgTxt ("Usage: p = bisect (A, mode)") ; } /* ---------------------------------------------------------------------- */ /* get input matrix A */ /* ---------------------------------------------------------------------- */ A = sputil_get_sparse_pattern (pargin [0], &Amatrix, &dummy, cm) ; S = (A == &Amatrix) ? NULL : A ; /* ---------------------------------------------------------------------- */ /* get A->stype, default is to use tril(A) */ /* ---------------------------------------------------------------------- */ A->stype = -1 ; transpose = FALSE ; if (nargin > 1) { buf [0] = '\0' ; if (mxIsChar (pargin [1])) { mxGetString (pargin [1], buf, LEN) ; } c = buf [0]; if (tolower (c) == 'r') { /* unsymmetric case (A*A') if string starts with 'r' */ transpose = FALSE ; A->stype = 0 ; } else if (tolower (c) == 'c') { /* unsymmetric case (A'*A) if string starts with 'c' */ transpose = TRUE ; A->stype = 0 ; } else if (tolower (c) == 's') { /* symmetric case (A) if string starts with 's' */ transpose = FALSE ; A->stype = -1 ; } else { mexErrMsgTxt ("bisect: p=bisect(A,mode) ; unrecognized mode") ; } } if (A->stype && A->nrow != A->ncol) { mexErrMsgTxt ("bisect: A must be square") ; } C = NULL ; if (transpose) { /* C = A', and then bisect C*C' */ C = cholmod_transpose (A, 0, cm) ; if (C == NULL) { mexErrMsgTxt ("bisect failed") ; } A = C ; } n = A->nrow ; /* ---------------------------------------------------------------------- */ /* get workspace */ /* ---------------------------------------------------------------------- */ Partition = cholmod_malloc (n, sizeof (int), cm) ; /* ---------------------------------------------------------------------- */ /* order the matrix with CHOLMOD's interface to METIS_NodeND */ /* ---------------------------------------------------------------------- */ if (cholmod_bisect (A, NULL, 0, TRUE, Partition, cm) < 0) { mexErrMsgTxt ("bisect failed") ; } /* ---------------------------------------------------------------------- */ /* return Partition */ /* ---------------------------------------------------------------------- */ pargout [0] = sputil_put_int (Partition, n, 0) ; /* ---------------------------------------------------------------------- */ /* free workspace */ /* ---------------------------------------------------------------------- */ cholmod_free (n, sizeof (int), Partition, cm) ; cholmod_free_sparse (&C, cm) ; cholmod_free_sparse (&S, cm) ; cholmod_finish (cm) ; cholmod_print_common (" ", cm) ; /* if (cm->malloc_count != 0) mexErrMsgTxt ("!") ; */ #else mexErrMsgTxt ("METIS and the CHOLMOD Partition Module not installed\n") ; #endif }