/* File name: lind.c Created by: Ljubomir Buturovic Created: 12/05/2002 Purpose: linear discriminant learning and prediction. */ /* Copyright 2004 Ljubomir J. Buturovic Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. */ static char rcsid[] = "$Id: lind.c,v 1.28 2004/10/21 01:53:44 ljubomir Exp $"; #include #include #include #include #include "lind.h" #include "lau.h" #include "lerr.h" #include "lmat.h" #include "pau.h" #include "bagging.h" /* Debugging function: multiply 'a' and 'b' and check the product is identity matrix. */ static void inverse_check(float **a, float **b, int d, FILE *fdbg) { int i; int j; char *cTmp; float **product; cTmp = rcsid; /* kill compiler warning */ /* The code is disabled for now because it produces enormous debug file in cross-validation. Enable as needed. */ if (a && b && fdbg && 0) { product = fmx_mult(a, d, d, b, d, 0); if (product) { fprintf(fdbg, "inverse_check():\n"); for (i = 0; i < d; i++) { for (j = 0; j < d; j++) fprintf(fdbg, "%12.5g\t", product[i][j]); fprintf(fdbg, "\n"); } mx_free((void **) product, d); } } } /* Multiply transpose of input data matrix 'x' with itself. The result is a d by d matrix. This is the first term of the pseudo-inverse matrix for a linear discriminant classifer. */ static float **t_mult(float **x, int nv, int d) { int i; int j; int k; double s; float **mx; mx = fmx_alloc(d, d); if (mx) { for (i = 0; i < d; i++) for (j = 0; j < d; j++) { s = 0.0; for (k = 0; k < nv; k++) s += x[k][i]*x[k][j]; mx[i][j] = s; } } return mx; } /* Calculate linear discriminant classifier using pseudo-inverse solution. The returned value is c by d+1 matrix (number of classes by number of features plus 1). The last column contains biases. The computations follow Christopher M. Bishop, Neural Networks for Pattern Recognition, Section 3.4.3, Pseudo-inverse solution. Oxford University Press, Oxford, 1995. In case of error, return NULL and set 'errc'. The errors are EINVAL if 'dset' is NULL, memory allocation errors, and singular matrix (LERR_SINGULAR). */ float **lind_learn(struct dataset *dset, int *errc, FILE *fdbg) { int i; int k; int d; int iclass; int icum; int status; float tk; float *xmean; float **lin = (float **) 0; float **mult; float **inverse; float **pseudo_inverse; float **target; if (dset) { d = dset->d; target = fmx_alloc(dset->nv, dset->c); if (target) { fmx_set(target, dset->nv, dset->c, 0.0); iclass = 0; icum = dset->nd[0]; for (i = 0; i < dset->nv; i++) { target[i][iclass] = 1.0; if ((i == icum-1) && (iclass < dset->c-1)) { iclass++; icum += dset->nd[iclass]; } } mult = t_mult(dset->x, dset->nv, d); if (mult) { inverse = fmx_inv(mult, d, (float *) 0, (float *) 0, errc); if (inverse) { if (fdbg) inverse_check(mult, inverse, d, fdbg); pseudo_inverse = fmx_mult(inverse, d, d, dset->x, dset->nv, 1); if (pseudo_inverse) { lin = fmx_alloc(dset->c, d+1); if (lin) { status = fmx_tmulta(lin, pseudo_inverse, d, dset->nv, target, dset->c, 0); if (!status) { /* Compute bias terms now using equations (3.48) and (3.49) from Bishop. */ xmean = fmx_mean(dset->x, dset->nv, dset->d); if (xmean) { for (k = 0; k < dset->c; k++) { tk = fmx_col_mean(target, dset->nv, k); lin[k][d] = tk-fvec_dot(lin[k], xmean, d, (int *) 0); } vx_free(xmean); } } else *errc = LERR_INTERNAL; } mx_free((void **) pseudo_inverse, d); } mx_free((void **) inverse, d); } mx_free((void **) mult, d); } mx_free((void **) target, dset->nv); } } else if (errc) *errc = EINVAL; return lin; }